Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001671895.1_202016-06- 20] 17 sequences; 12,119,261 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq12 105 6e-18 seq9 105 6e-18 seq11 96.9 3e-15 >seq12 Length=1077529 Score = 105 bits (116), Expect = 6e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | || || || | || ||| | || | ||||| Sbjct 64477 ATGCAAATTTTNGTCAANACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 64418 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 64417 GACACTATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 64358 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| | ||| || ||||| ||||| | ||||| | || |||||| Sbjct 64357 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 64298 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| ||||| | ||| |||| ||||| | ||||| || Sbjct 64297 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 64251 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | || || | ||| | ||||| | Sbjct 64933 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 64874 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || |||||||| | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 64873 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 64814 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | ||| || || || ||||| | ||||| | || || ||| Sbjct 64813 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 64754 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || || | ||||| || || || || ||||| || Sbjct 64753 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 64707 >seq9 Length=438012 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || || ||||| || | ||||| | ||| | ||||| ||||| || Sbjct 67892 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 67951 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||||| ||||| ||||| || || || || ||||||||| | Sbjct 67952 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 68011 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | ||||| |||||||||||| Sbjct 68012 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 68071 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | || | ||| ||||| | ||||| || Sbjct 68072 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 68109 >seq11 Length=665751 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || ||||| || | ||||| | ||| | ||||| |||||||| Sbjct 617549 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 617490 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||| ||||| ||||| || || || || ||||||||| | Sbjct 617489 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 617430 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | ||||| ||||| ||||| Sbjct 617429 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 617370 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | ||| ||||||||||| | ||||| || Sbjct 617369 GAATCCACTTTACATTTGGTCCTGAGATTAAGAGGTGG 617332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662298284240