Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001735825.1_202016-09- 20] 972 sequences; 12,811,400 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15 199 3e-46 >seq15 Length=1076648 Score = 199 bits (220), Expect = 3e-46 Identities = 550/836 (66%), Gaps = 43/836 (5%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 460467 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 460526 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 | || || ||||||||| | ||| | || || | ||| | || || || Sbjct 460527 TGTTAACTTGAAATCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGG 460586 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 ||| ||| ||| || | || ||| | ||||||||||| ||| ||| | || || Sbjct 460587 TCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGC 460646 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 460647 ATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCT 460706 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832 ||| || | || ||| |||||||||||||| ||||| |||||||||||| || | Sbjct 460707 AGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACG 460766 Query 101833 TTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------ACA 101865 ||| |||| | || ||||| ||| ||| || || Sbjct 460767 TTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACT 460826 Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||| || || || | ||| || |||||||| ||||||| || || | Sbjct 460827 GACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGG 460886 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATCA 101984 ||||| |||| ||| | || |||||||| |||||| ||||| |||| ||| ||| | Sbjct 460887 GTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTTAGTTTATGAATAA 460945 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTCT 102043 |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 460946 CCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTTA 461004 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 461005 GCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCT 461064 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC- 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 461065 TTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACCT 461124 Query 102163 AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCA 102220 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 461125 TGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAGT 461181 Query 102221 ACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAA 102277 | | |||||| ||| || |||| || |||| ||||| || |||| |||| Sbjct 461182 ATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAAA 461241 Query 102278 CTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 ||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 461242 CTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 461297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361246920527972