Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737145.2_202016-10- 24] 156 sequences; 12,078,565 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 >seq10 Length=733974 Score = 131 bits (144), Expect = 2e-25 Identities = 486/749 (65%), Gaps = 36/749 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 391552 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 391493 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| | | || || || | | | || || || ||| | || Sbjct 391492 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 391434 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 ||| |||| ||| | ||| || || || || || | ||| || ||| || || Sbjct 391433 CGAAAGCAAC-----CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 391379 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGAT 93018 | ||||| ||||| | | || |||| ||||| |||||| |||||| | | || Sbjct 391378 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 391322 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTAC 93072 | | || || || | | |||| | || || || ||| |||||| || | | Sbjct 391321 TTCCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTTC 391267 Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132 | || | ||| ||||| ||||||||||| || ||||||||||||| | ||||| Sbjct 391266 AA-ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAA 391208 Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 || ||| || |||||||| || | || |||| || || | ||| || || || || Sbjct 391207 TTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGC 391148 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 ||| ||| || ||||| | |||||| | || ||||| || || | | ||| |||| Sbjct 391147 AAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAA 391088 Query 93253 ATTTGCGGAA--TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAA 93310 ||| | | || ||||||| |||||||||| ||||| || | || Sbjct 391087 CAAGGCGTCAGCGTCTTG--GATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT 391030 Query 93311 GGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTA 93370 || | || | || || || || | | | || | || | | || ||||| ||| Sbjct 391029 GGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTA 390970 Query 93371 TCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAG 93430 ||||| |||| || || ||||||| || | ||| || || |||||||| |||||| Sbjct 390969 TCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAG 390910 Query 93431 AAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 |||| | || || | || || ||||| || || | || || | |||||||| Sbjct 390909 AAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTA 390850 Query 93491 ACTATACCATCGGATGCTGCaaaaaaaGC 93519 || ||||| || || || || ||||| || Sbjct 390849 ACAATACCGTCAGAAGCGGCGAAAAAGGC 390821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859714121440