Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737155.1_202016-09-
21] 1,156 sequences; 12,932,175 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 7e-25
>seq10
Length=742737
Score = 129 bits (142), Expect = 7e-25
Identities = 484/746 (65%), Gaps = 30/746 (4%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||| ||||| || ||||| || |
Sbjct 395162 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 395103
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
||| || || | ||| | | || || || | | | || || || ||| | ||
Sbjct 395102 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 395044
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
||| | || ||| | ||| || || || || || | ||| || ||| || |||
Sbjct 395043 CGA---AAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAG 394987
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGATTA 93020
||||| ||||| | | || |||| ||||| |||||| |||||| | | |||
Sbjct 394986 CGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAATTT 394930
Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTACGA 93074
| || || || | | |||| | || || || ||| |||||| || | | |
Sbjct 394929 CCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTTCAA 394875
Query 93075 CATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134
|| | ||| ||||| ||||||||||| || ||||||||||||| | ||||| |
Sbjct 394874 -ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATT 394816
Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194
| ||| || |||||||| || | || |||| || || | ||| || || || ||||
Sbjct 394815 CGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAA 394756
Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254
| ||| || ||||| | |||||| | || ||||| || || | | ||| ||||
Sbjct 394755 AGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACA 394696
Query 93255 TTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
||| | | || |||||| |||||||||| ||||| || | || ||
Sbjct 394695 AGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGG 394637
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373
| || | || || || || | | | || | || | | || ||||| ||||||
Sbjct 394636 ATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCG 394577
Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433
|| |||| || || ||||||| || | ||| || || |||||||| |||||||||
Sbjct 394576 ATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAA 394517
Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493
| | || || | || || ||||| || || | || || | |||||||| ||
Sbjct 394516 CTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACA 394457
Query 93494 ATACCATCGGATGCTGCaaaaaaaGC 93519
||||| || || || || ||||| ||
Sbjct 394456 ATACCGTCAGAAGCGGCGAAAAAGGC 394431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556852753361440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |