Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737155.1_202016-09- 21] 1,156 sequences; 12,932,175 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1022 93.3 4e-14 seq828 91.5 1e-13 seq1137 87.8 2e-12 seq779 84.2 2e-11 seq548 84.2 2e-11 seq12 82.4 7e-11 >seq1022 Length=435 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||||||||| ||||| || |||||||| || ||| ||| || ||||| Sbjct 169 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 228 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | | || || || |||||||| ||||||||||| ||| || Sbjct 229 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAATTT 287 Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||| | | || | || |||| | || || || | || | |||||| |||| Sbjct 288 TCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGG 347 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||| || |||||||||||||| Sbjct 348 TCAAAGTCTTGACGAAAATCTGCAT 372 >seq828 Length=471 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||||||||| ||||| || |||||||| || ||| ||| || ||||| Sbjct 80 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 139 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || | | || || || |||||||| ||||||||||| ||| || Sbjct 140 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGA-ATT 197 Query 133577 TTGC--TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || | |||| | |||| ||||||| | || || || | ||| | || || || Sbjct 198 TTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCT 257 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| |||||||| ||||| Sbjct 258 GTTAGAGTTTTGACGAAAATTTGCAT 283 >seq1137 Length=382 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||||||| || || | || | || ||| || || |||||||| |||||||| Sbjct 132 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 191 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 192 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 251 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 252 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 287 >seq779 Length=479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||| ||| || || | || | || ||| || || |||||||| |||||||| Sbjct 251 GTCTTCTAGCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 192 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 191 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 132 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 131 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 96 >seq548 Length=554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || ||| |||| || || | || | || ||| || || |||||||| |||||||| Sbjct 210 GTCTTCTAGCCGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 151 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||| | | || | |||||||| || || || || | |||| Sbjct 150 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 91 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| ||||||| ||| || || || |||||||| Sbjct 90 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 55 >seq12 Length=1068448 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || ||||||||||| || || ||||| || ||| ||| || ||| Sbjct 67143 AAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCTAGC 67202 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | | || || || |||||||| ||||||||||| ||| Sbjct 67203 TGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC-TTGAAT 67261 Query 133575 TTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| | ||| | | || | || |||| | || || || | || | |||||| || Sbjct 67262 TTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACC 67321 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| ||| || |||||||||||||| Sbjct 67322 GGTCAAAGTCTTGACGAAAATCTGCAT 67348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483413814569440