Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737155.1_202016-09-
21] 1,156 sequences; 12,932,175 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq12 102 8e-17
seq1022 98.7 9e-16
seq828 84.2 2e-11
>seq12
Length=1068448
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| |||||||| | | |||||||| |||||||| || || || || |
Sbjct 67130 CAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCT 67189
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||||| ||||| ||||||| | |||| | | |||||||||||||| || |||||
Sbjct 67190 ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTC 67249
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|| || |||||| || | | || | ||||||| | || ||||| | ||
Sbjct 67250 CTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 67309
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133
| |||||||| |||| ||| || | |||||||||||| | ||||||
Sbjct 67310 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 67358
Score = 86.0 bits (94), Expect = 6e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| ||||||| | |||| | | |||||||||||||| || ||||| ||
Sbjct 67443 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 67502
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| || | | || | ||||||| | || ||||| | || |
Sbjct 67503 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 67562
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133
|||||||| |||| ||| || | |||||||||||| | ||||||
Sbjct 67563 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 67607
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| | ||| ||||| || | | || || ||||| ||||||||||| || ||| |
Sbjct 66902 CAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCT 66961
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
|||||| || || ||||| | | | || | | ||||||||| ||||| || |||||
Sbjct 66962 ACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTC 67021
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
|||||| ||| || ||| | | || | ||| |||| | || || || | ||
Sbjct 67022 TTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGT 67081
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
| || || || || |||||||| | |||||| |||||
Sbjct 67082 TATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67120
>seq1022
Length=435
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 169 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 228
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 229 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 288
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
|| | | || | ||||||| | || ||||| | || | |||||||| ||
Sbjct 289 CGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGT 348
Query 132100 CAGAGTTTTTATGAAAATCTGCATGACTTATTAG 132133
|| ||| || | |||||||||||| | ||||||
Sbjct 349 CAAAGTCTTGACGAAAATCTGCATAATCTATTAG 382
>seq828
Length=471
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979
||||| | | ||||| || ||||||||||| || || || | ||||| |||||
Sbjct 80 ATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTG 139
Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039
||||||| | |||| | | |||||||||||||| || ||||| || || ||||||
Sbjct 140 CTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTT 199
Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099
||| | | || | ||| |||| | || || || | || | || || || ||
Sbjct 200 ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGT 259
Query 132100 CAGAGTTTTTATGAAAATCTGCAT 132123
|||||||| | |||||| |||||
Sbjct 260 TAGAGTTTTGACGAAAATTTGCAT 283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476604312968160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |