Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737155.1_202016-09-
21] 1,156 sequences; 12,932,175 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 4e-19
seq9 93.3 3e-14
seq548 87.8 1e-12
>seq12
Length=1068448
Score = 109 bits (120), Expect = 4e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
|| ||||||||||| || || || || || || ||||| |||||| ||||| ||| |
Sbjct 510048 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 510107
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
|| || ||| | | || || || || ||||| ||||| | || |||
Sbjct 510108 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 510167
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||||| | || | ||| || || ||||| |||||| || |||| || ||| |||
Sbjct 510168 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 510227
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||||| ||||| |||||||| ||||| || || ||||| || |||| ||
Sbjct 510228 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 510277
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| || ||||| | || || ||||| || ||| | || ||| | |
Sbjct 67120 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 67061
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || ||| || ||| || |||||||| | || ||||||
Sbjct 67060 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 67001
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| || | |||| ||| || || ||| |||||||| || ||| || || ||||||
Sbjct 67000 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 66941
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| || || || || ||||| || |||| ||
Sbjct 66940 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 66894
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||||||||| || ||| |||| || ||||| || ||| | || ||| |
Sbjct 66892 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 66833
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || || ||||||| ||||| ||||| | || || ||
Sbjct 66832 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 66773
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| ||| || || ||| |||||||| || ||| || || |||||
Sbjct 66772 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 66713
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTT 106477
|| ||||| || || || || || | || ||||||||
Sbjct 66712 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTTGAGGTT 66675
>seq9
Length=460511
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327
|||||| || || |||||||| |||||||| || ||||| ||| | || || |
Sbjct 81638 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 81697
Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387
|| | | || || ||| ||| ||||| ||||| | || ||| |||||||| |
Sbjct 81698 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 81757
Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447
|| | ||| || || ||||| ||||| || ||| || || |||||||| |||||
Sbjct 81758 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 81817
Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|||||| || | || ||||| ||||| || |||| ||
Sbjct 81818 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 81856
>seq548
Length=554
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| || ||||| | || || ||||| || ||| | || ||| | |
Sbjct 283 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 342
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| || ||| | | || ||| |||||| ||||| ||||| | || ||||||
Sbjct 343 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 402
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| ||| || || ||| |||||||| || ||| || || |||||
Sbjct 403 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 462
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTT 106477
|| ||||| || || || || || | || ||||||||
Sbjct 463 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402323931678848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |