Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737175.1_202016-09- 21] 1,050 sequences; 12,822,094 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 seq305 100 2e-16 seq847 86.0 5e-12 >seq12 Length=1066807 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 508143 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 508202 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| || || || || |||||| | || || Sbjct 508203 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 508262 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | |||||||| || || ||| |||||||| | |||| || |||| ||| Sbjct 508263 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 508322 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || |||||||||||||| ||| |||| || |||| |||| || Sbjct 508323 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 508372 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||||||| | || |||||||| ||| | || ||||| || || Sbjct 67380 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 67321 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| | ||| || | || ||||| || || |||||||||||||||||| Sbjct 67320 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 67261 Query 29166 ATGGTGTTACGATTACGAGGAGG 29188 ||||||| |||| |||| || Sbjct 67260 TTGGTGTTGAGATTGAGAGGTGG 67238 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||| || |||||||| || ||| ||| | | Sbjct 68296 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 68237 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| |||||| || || |||||| | || ||||||| Sbjct 68236 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 68177 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || || || || ||||| | ||| || | |||||||| Sbjct 68176 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 68117 Query 29142 ATTCAGAAGGAATCTAC 29158 ||||||||||| || || Sbjct 68116 ATTCAGAAGGAGTCCAC 68100 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| ||| |||| || || || || ||| || ||| | | Sbjct 67236 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 67177 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| |||||| || || |||||| | || ||| || Sbjct 67176 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 67117 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| || || ||||| |||||| | ||| || | || |||||| Sbjct 67116 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 67057 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||| ||||| || ||||||||| | || || Sbjct 67056 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTT 67025 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||| || |||||||| || || ||| || | Sbjct 68068 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 68009 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | ||||| ||||| || || |||||| | || ||||||| Sbjct 68008 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 67949 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || | || ||||| | ||| || | || ||||| Sbjct 67948 CAGAGGTTGATCTTTGCCGGTAAGCGGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 67889 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||||||||| ||||||| |||| |||| || Sbjct 67888 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 67842 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| || || |||||| | || ||||||||||||| | || ||||| || || Sbjct 67756 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATTTTTGCCGGTAAG 67697 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||||||||| | ||| || | ||||| || |||||||| || ||||| | || Sbjct 67696 CAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAGTCTACGTTGCAT 67637 Query 29166 ATGGTGTTACGATTACGAGGAGG 29188 ||||||| |||| |||| || Sbjct 67636 TTGGTGTTGAGATTGAGAGGTGG 67614 >seq305 Length=658 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||||||| | || |||||||| ||| | || ||||| || || Sbjct 559 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 500 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| | ||| || | || ||||| || || |||||||||||||||||| Sbjct 499 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 440 Query 29166 ATGGTGTTACGATTACGAGGAGG 29188 ||||||| |||| |||| || Sbjct 439 CTGGTGTTGAGATTGAGAGGTGG 417 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| ||| |||| || || || || ||| || ||| | | Sbjct 415 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 356 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| |||||| || || |||||| | || ||| || Sbjct 355 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 296 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| || || ||||| |||||| | ||| || | || |||||| Sbjct 295 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 236 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||| ||||| || ||||||||| | || || Sbjct 235 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTT 204 >seq847 Length=439 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||| || |||||||| || || ||| || | Sbjct 364 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 305 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | ||||| ||||| || || |||||| | || ||||||| Sbjct 304 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 245 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || | || ||||| | ||| || | || ||||| Sbjct 244 CAGAGGTTGATCTTTGCCGGTAAGTAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 185 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||||||||| ||||||| |||| |||| || Sbjct 184 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330518637750