Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737175.1_202016-09-
21] 1,050 sequences; 12,822,094 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq12 129 4e-25
seq305 123 2e-23
>seq12
Length=1066807
Score = 129 bits (142), Expect = 4e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| |||||||| || | ||| |||||||| | ||||| || |||
Sbjct 67238 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 67297
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || || ||||||||||||| ||||||||| | ||
Sbjct 67298 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 67357
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| ||||||||| || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 67358 ATACCTTCTTTATC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 67415
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 67416 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67464
Score = 114 bits (126), Expect = 1e-20
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| ||||||||||| | || ||| || || | || ||||| |||
Sbjct 67614 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 67673
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || | |||| |||| ||| || |||||||||||||||| |||||||| | ||
Sbjct 67674 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 67733
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| |||||| || || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 67734 ATACCTTCCTTGTC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 67791
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || || || || || ||||||||||||||
Sbjct 67792 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 67840
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| || | ||| |||||||| | ||||| ||||||
Sbjct 508372 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 508313
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || |||||||| || || ||||| ||||||| ||||| || | ||
Sbjct 508312 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 508253
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || |||| ||||| || ||| ||||| || || ||
Sbjct 508252 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 508193
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | || ||||| || ||||||| ||| || || ||||||||||| ||
Sbjct 508192 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 508143
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/202 (70%), Gaps = 8/202 (4%)
Strand=Plus/Plus
Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971
|||| ||||||||| | |||||| || |||| || | | || || | ||| || ||
Sbjct 67039 AGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACC 67098
Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA----TCAACT 43027
|||||||||||||| || || || | || | |||||| || || ||| || ||
Sbjct 67099 GGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTC-TTGAATTTTCGAC- 67156
Query 43028 CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTA 43087
|| || || ||| ||||| || || || |||| |||||||| || || || |
Sbjct 67157 --TTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCA 67214
Query 43088 GAGTTTTCACAAAAATTTGCAT 43109
| || || ||||||||||||||
Sbjct 67215 GTGTCTTGACAAAAATTTGCAT 67236
>seq305
Length=658
Score = 123 bits (136), Expect = 2e-23
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| ||||||| || | ||| |||||||| | ||||| || |||
Sbjct 417 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 476
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| || | | || || | ||| || || ||||||||||||| ||||||||| | ||
Sbjct 477 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 536
Query 43003 ACACCTTCTTTTTCGCTGA--TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060
| ||||||||| || ||| | ||| |||||| || ||| |||||| || || |
Sbjct 537 ATACCTTCTTTATC-TTGAATTTTACT-TTTGACGTTGTCAATAGTGTCGGAAGATTCAA 594
Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| |||| |||||||| || || ||||||||||| || |||||||||||
Sbjct 595 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381364719660900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |