Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737175.1_202016-09- 21] 1,050 sequences; 12,822,094 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 8e-13 seq15 87.8 3e-12 >seq5 Length=564210 Score = 89.7 bits (98), Expect = 8e-13 Identities = 310/475 (65%), Gaps = 13/475 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || || Sbjct 306691 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 306750 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992 | ||||| ||||| || || | || ||| || | |||||| | || || || Sbjct 306751 ATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 306807 Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052 || ||||| ||| || ||| | || ||| | ||||||||||| ||| | || ||| Sbjct 306808 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 306867 Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111 ||||| | | || | || || || | || ||| | |||||| | || || || Sbjct 306868 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 306926 Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171 ||||||||| || || ||||||| |||| || || || |||| | || | || Sbjct 306927 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 306983 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | || | ||| | |||| || ||||| || ||||| || || | | || | Sbjct 306984 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 307043 Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||| | || | | || | | || ||| |||| || ||||||| | Sbjct 307044 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 307102 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 | || | ||| |||||||| || ||| | |||| || || || || ||||| Sbjct 307103 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 307157 >seq15 Length=1084644 Score = 87.8 bits (96), Expect = 3e-12 Identities = 179/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092 ||| ||| | | || |||| || || ||| || ||||||||||| || || ||||| Sbjct 464692 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATT 464633 Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150 || |||||||| | || | || || |||| ||||| ||| |||||| | || || Sbjct 464632 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 464575 Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209 ||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| || Sbjct 464574 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTAAAGACAAATCCCTACGATAGAAG 464516 Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269 ||| | ||| | | ||||| || || ||||| || ||||||| | || || || || Sbjct 464515 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCA 464456 Query 70270 CTGTTTGGCTCAGTTTTA 70287 ||| | ||||| || Sbjct 464455 TATTTTTTCACAGTTCTA 464438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741049473598000