Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq5 360 2e-94 seq10 199 5e-46 >seq5 Length=559968 Score = 360 bits (398), Expect = 2e-94 Identities = 1337/2077 (64%), Gaps = 55/2077 (3%) Strand=Plus/Minus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| ||||||||||| | ||| ||||| | || || | | ||||||||| || || | Sbjct 302608 CAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCT 302549 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCT 52921 | | || ||||||||||||||||||||||||||||||| ||| | || Sbjct 302548 TCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCAC 302489 Query 52922 GCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 52979 | || | ||| |||| ||| ||| |||||| || || | | || || |||| Sbjct 302488 G---TAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCA 302432 Query 52980 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 53038 | || ||||| |||||||||| ||||||||||| ||| || || || || | ||| ||| Sbjct 302431 TGTTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAAT-TCT 302373 Query 53039 TCTGGAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCT---TG 53092 | ||||| |||| || | ||||| || ||| | | ||||| || || | Sbjct 302372 TGTGGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTG---TAATCAGATACTGTTTC 302316 Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || | |||| ||| | | || || | | || | | || || || || Sbjct 302315 ATACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACC 302256 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 || ||||| || || || || | || | ||| ||||| || ||||| | | | Sbjct 302255 TGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACAT 302196 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA 53272 ||||||| ||||| ||||| | || |||||||| ||||| ||||||| || | Sbjct 302195 TCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAA 302136 Query 53273 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAG--AGGT-TCCCAATTCCAAAGATCC 53329 ||||||| ||| ||| | | || |||||||| |||| ||||||| ||| | | Sbjct 302135 TTTCTAATACC--ATGCT-TCATGATATCTTTTCTTAAGGTGTCCCAATCCCACATGCCG 302079 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACA 53389 | ||| ||||| ||||| | | || |||||| Sbjct 302078 TAGGGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGG 302019 Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 | || |||||||| || ||||||| ||||||||||||| || || | | | | | Sbjct 302018 AAAGTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGA 301959 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 53509 ||||| ||||| ||||| | ||||||| | |||||| ||||||||| || Sbjct 301958 TAAATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAA 301899 Query 53510 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 53569 ||| || || || | ||| || | ||||||||||| | | | || |||||||||||| Sbjct 301898 CGTAACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTC 301839 Query 53570 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGG 53629 |||| || || |||||| || ||| || |||||| ||| || | | | || | Sbjct 301838 ATATTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAA 301779 Query 53630 TTTCTGACAATTACTTTGACCACATCCT-TCAGTTTGAGAAAATCAAATTGTCCATCTAT 53688 || | || ||||| | | || | | | ||| ||| | | ||| | | | Sbjct 301778 TTACGAGTAACAACTTTAGCAATTTCATGTAATTTTTTGAAGTTGTA--TGTGGAAGTCT 301721 Query 53689 TACAAACATG------TTCAATG-------------CAATAGATGCCAGATTACAAACGG 53729 ||| | | | ||||||| ||| || |||| |||||||| | Sbjct 301720 TACCATCCTCAGAAGTTTCAATGAATGCTGGTAAGGCAACGGAAGCCAAGTTACAAACAG 301661 Query 53730 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA-AAGATTACTACACTTGATG 53788 || |||| | | | | |||| | || ||| ||| ||| || | |||||||| Sbjct 301660 CTGTTTCATCTGGAGCTGAGTATTCAACAATTTCACAGCATAAGTTTGATG-ACTTGATG 301602 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 ||||| |||| ||||||| ||| ||||||| |||||||| |||| || ||| || Sbjct 301601 ACACCTAAGTTTTTTTGATTAGATTTTCTGTTACAAGCATCCTTGTAAACAACGAAAGGT 301542 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 |||||||||||| | || | ||| | ||| | | ||| | | || || || | Sbjct 301541 GTACCAGTTTCAGTTTGAGCTTCCAAAATGGAATACCATAATTTTTGGGCTTTGAT---A 301485 Query 53909 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAA 53968 | || | |||| | ||||| | ||||| | ||||||||||| || || Sbjct 301484 GTCTTACCACGACCTTCTTTCTCGTAGCGGGTATATAGAGCCTCAAACTCGTCACCGTAA 301425 Query 53969 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028 || | || |||||| | ||| | | || | ||| || | || | Sbjct 301424 CAATCGCTTAAACCAGGAGCTGATGTTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCG 301365 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 || || ||||| || |||||||||||||| ||||| || | |||||| | | | | Sbjct 301364 ACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 301305 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 ||||| || || ||||| ||| ||| | || | | ||||||| |||||| ||| Sbjct 301304 TCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCATGGT 301245 Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208 |||| ||| | || | | ||||| | ||| || || ||||| || | || | ||| Sbjct 301244 TCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAACATAACGGGCG 301185 Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268 |||||||| |||| | | ||| ||||| | ||| || || | ||| || || || | Sbjct 301184 GTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTACCAGCA 301125 Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 || || ||| | | |||||| ||| || |||||| || || || || |||| Sbjct 301124 ATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAGCAGTTTTG 301065 Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388 || || || || ||| || || || || || || ||||| ||| || ||| ||||| Sbjct 301064 GAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATG 301005 Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448 || | ||||| |||||||| | ||| || ||||| || || || ||| Sbjct 301004 GCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGAACAACGTTGGA 300945 Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508 || ||||| ||||| ||||| ||| | | || ||||| || | ||| | || ||| Sbjct 300944 GAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAGCAGCCTCGATA 300885 Query 54509 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 54568 || | || || |||| |||||| | ||| | | || || || | ||| | | | Sbjct 300884 TCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGACGTTCGGCCA-C 300826 Query 54569 TTG-TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 54627 ||| ||| ||| | || || || || |||||||||||||||||||||||| |||| Sbjct 300825 TTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAAAATAACTGTA 300766 Query 54628 -TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686 |||||| |||| || || | ||| | ||||| | ||||||||| | || | || | Sbjct 300765 CTGAAAA-TCTCTGTCATAGACAATTGCGGAGTTCAATTTATCCTTGTTTTCCATGACAA 300707 Query 54687 CATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 54746 || | | | || || || |||| | || ||| | || |||||| || Sbjct 300706 TATTGTAGACATCATCAGAGATCATGGGAGCGGGCTTACCAGTAGCAGCATTGACGTATC 300647 Query 54747 TAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATA 54806 || | | ||| | | |||| | |||| ||||| | |||| ||| |||| ||| || | Sbjct 300646 TATAAAGATCTTCGACAACTTTAGAAAATTGTTTTGTAGTTTGTTTATGTAAATTAGAAA 300587 Query 54807 CGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| |||||||| ||||| |||| ||||| ||||| Sbjct 300586 TGGCAATTCTAGCAGCTAGGGTGGCGTAATCTGGATG 300550 >seq10 Length=720952 Score = 199 bits (220), Expect = 5e-46 Identities = 590/900 (66%), Gaps = 15/900 (2%) Strand=Plus/Minus Query 23824 CTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTT 23883 |||| |||||||| || |||||||| ||| || | |||||||| || ||||| | Sbjct 395467 CTTG-GACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCT 395409 Query 23884 TACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCT 23941 |||| | || || || ||||||||||||||| | || || || || ||| |||| Sbjct 395408 TACCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT 395349 Query 23942 TTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCAT 24001 | | | || || || | || ||| || ||||| ||||| | ||| ||||| | Sbjct 395348 TGTTA--CCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAA 395291 Query 24002 TTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT-TCTT-GTTCA 24059 ||| ||||| |||| | |||||| | || | ||||| | |||| ||||| Sbjct 395290 GTCAGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTCC--AAGAAGTATCTTTGTTCA 395233 Query 24060 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAA 24119 || || || || || | ||| | || | || ||| | | ||| Sbjct 395232 ATTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAA 395173 Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || |||| ||| ||||| || ||| ||| | ||| |||||||||| || |||||| Sbjct 395172 TGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCG 395113 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 |||||||| || | |||||||| | || | |||||| | ||| || ||||| ||||| Sbjct 395112 TTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAG 395053 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCG 24299 || || || || || | ||||| | | |||||||||| |||||||| ||| | | Sbjct 395052 GAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAG 394993 Query 24300 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 ||| ||| || ||||| || |||||| |||||||||| | || || Sbjct 394992 GCGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 394933 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || | || ||||| || | | | |||| ||| || || | || ||||| ||| Sbjct 394932 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATC 394873 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 || | || |||| || ||||| |||||||| ||||| || |||||||||| Sbjct 394872 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 394813 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | ||||| | ||| || ||||| | | || ||| | || |||||||| || || Sbjct 394812 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 394753 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG-TCTGGT-- 24593 |||||| || || ||||| || | || || ||| || | ||| ||| || Sbjct 394752 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTTC 394693 Query 24594 GTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653 || || ||||| |||| |||||| ||||| | ||| | |||||| | ||||| || Sbjct 394692 ATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAA 394633 Query 24654 GATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 || || || || || || | |||||| ||||| || | || || |||| |||| Sbjct 394632 GAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAACA 394573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720227018800