Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 >seq12 Length=1041327 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| ||| |||| || || || || ||| || ||| | | Sbjct 50738 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 50679 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| ||||||| || || |||||| | || ||| || Sbjct 50678 GACACTATTGACAACGTTAAGTCAAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 50619 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || |||||||| |||||| | ||| || | || |||||| Sbjct 50618 CAAAGATTGATCTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 50559 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||| ||||| || ||||||||| | || || Sbjct 50558 ATTCAAAAGGAGTCCACTCTTCACCTCGTCTT 50527 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 482493 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 482552 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| || || || || |||||| | || || Sbjct 482553 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 482612 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||||||| | |||||||| || || ||| |||||||| | |||| || |||| ||| Sbjct 482613 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 482672 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || || |||||||||||||| ||| |||| || |||| |||| || Sbjct 482673 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 482722 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||||||| | || |||||||| ||| | || ||||| || || Sbjct 50882 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 50823 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||||| |||||| | ||| || | || ||||| || || |||||||||||||||||| Sbjct 50822 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 50763 Query 29166 ATGGTGTTACGATTACGAGGAGG 29188 ||||||| |||| |||| || Sbjct 50762 CTGGTGTTGAGATTGAGAGGTGG 50740 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| ||| |||| || || || || ||| || ||| | | Sbjct 51194 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 51135 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| |||||| || || |||||| | || ||||||| Sbjct 51134 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 51075 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || || ||||||||||| | ||| || | ||||| || Sbjct 51074 CAAAGATTGATCTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 51015 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||| || ||||| | || ||||||| |||| |||| || Sbjct 51014 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 50968 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || | || || ||||| || |||||||| || || ||| || | Sbjct 51422 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 51363 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | | ||||| ||||| || || |||||| | || ||||||| Sbjct 51362 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 51303 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || || || ||||| | ||| || | || ||||| Sbjct 51302 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 51243 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||||||||||||| ||||||| |||| |||| || Sbjct 51242 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 51196 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||| || |||||||| || ||| ||| | | Sbjct 51650 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 51591 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| |||||| || || |||||| | || ||||||| Sbjct 51590 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 51531 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | |||||||| || || || || ||||| | ||| || | |||||||| Sbjct 51530 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 51471 Query 29142 ATTCAGAAGGAATCTAC 29158 ||||||||||| || || Sbjct 51470 ATTCAGAAGGAGTCCAC 51454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335034236175