Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 194 2e-44 seq9 161 9e-35 seq10 131 2e-25 >seq5 Length=559968 Score = 194 bits (214), Expect = 2e-44 Identities = 422/629 (67%), Gaps = 2/629 (0%) Strand=Plus/Minus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || ||| || || | ||| || | |||||| | ||||| |||| || |||||| Sbjct 301375 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 301316 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | ||| || || || ||||| || | | |||||| || ||||||| Sbjct 301315 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAG 301256 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | ||||||||||| | |||| | | || || |||||||||| ||| ||||| | || Sbjct 301255 CATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAA 301196 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | |||||||| | | | | |||||| | || ||| ||||| | |||| Sbjct 301195 CATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGT 301136 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 || |||| | || |||| ||| | | || || ||| || | || || |||| Sbjct 301135 TTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCAC 301076 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 | ||| ||| || || ||||| |||| || || || || | || || || ||| || Sbjct 301075 CAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGT 301016 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 | ||||| || | | | |||||| ||||||||||| |||||| ||||| || | Sbjct 301015 CCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGA 300956 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 | || || ||||| || || | || ||||| |||| | ||||| ||||||| Sbjct 300955 ACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAG 300896 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || | || ||||| | ||||| || ||||| | || ||||| | | ||||||||| | Sbjct 300895 CAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGAC 300836 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 ||| | || | || | | |||| ||| || ||| || ||||| | |||| Sbjct 300835 GTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAA 300776 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 ||||||| || |||| ||||||| || || Sbjct 300775 AATAACTGTACTGAA-AATCTCTGTCATA 300748 Score = 183 bits (202), Expect = 3e-41 Identities = 549/839 (65%), Gaps = 15/839 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||| ||||||| || | | ||||| | || ||||||| ||| ||||| || || Sbjct 302609 TCAATAGTGAATTGAATTGCAGCAGATGCAGCTTGGGTTCTCAAATAGTACATACCGGTC 302550 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | ||| |||||||||||||||||||||| || ||||| | || || | Sbjct 302549 TTCAATCCCTTCTTCCATCCGTAAAAATGCATACTTGTTAGTTTACCCATAGTTGGGGCA 302490 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 || ||| ||| || ||| |||||| ||| | || | ||||||||||| Sbjct 302489 CGTAAGAATAAATTCAAAGAATGAGATTGATCAATATAGACAGAACGATCGGCTGCCATG 302430 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | ||| ||||| || || |||||||| || || |||| | || | | | | Sbjct 302429 TTAATGATAGTCTTTTGTGAAATTTCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGT 302370 Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGT---AACACAATTGTATTCTTT-AT 37082 || | || | || |||||| || ||||| ||| | || | || | ||| || Sbjct 302369 GGAACATTTGGTAAGCCTTGAATGGAGCCATTTTGTGTAATCAGA----TACTGTTTCAT 302314 Query 37083 GTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTG 37142 | | || ||| ||| | | | | || | || || || || || |||||||| Sbjct 302313 ACCCTCATCCCAAATACCTAAATCAACCAAGTCACGCAGTAAGTAAGGGTTCACAACCTG 302254 Query 37143 AAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTC 37202 || || || ||||| || | | | || |||||| ||| |||||| | | || Sbjct 302253 GAATTCACCGGATAAGACACGACGGGAGTACATATTGGAAGTGACTGGTTCGAAACATTC 302194 Query 37203 ATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATT 37262 ||||| || |||||||| ||||| |||||||||||||||||||| || | | ||| Sbjct 302193 ATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATT 302134 Query 37263 TCTCAATCCATG-TGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTG 37321 ||| | ||||| | || | ||| || || || | | ||||||||| | | || | Sbjct 302133 TCTAATACCATGCTTCATGATATCTTTTCTTAAGGT-GTCCCAATCCCA-CATGCCGTAG 302076 Query 37322 GGTTCTT-TAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATAT 37380 |||| || |||||||||| | ||||| ||||||| | || ||||| | | | Sbjct 302075 GGTTTTTGGTCCCACATATCAAACTGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAA 302016 Query 37381 GTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATAT 37440 || || || || |||| | | ||||||||| ||| || ||| | | ||||| ||| Sbjct 302015 GTTTCGTATGGACCGTCCTTCTGAGCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAA 301956 Query 37441 ATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCC 37500 || ||||| || ||||| ||||||| | ||||| || ||| |||| | | Sbjct 301955 ATAGTTTCAAAGATTTGGATATTTAGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGT 301896 Query 37501 AATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTA 37560 || | || || ||||| | ||| |||||||| | | | || ||||||||| || || Sbjct 301895 AACAGCATGAAAGTGTCAGCGAGACCTTGAACACCCAAAGCAATTGGTCTATGTCTCATA 301836 Query 37561 TTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619 || ||| | || |||| || || || ||||| ||| || | | | |||| ||| Sbjct 301835 TTGGATTTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAATGACTCTGTTTAAATT 301777 >seq9 Length=430657 Score = 161 bits (178), Expect = 9e-35 Identities = 466/710 (66%), Gaps = 8/710 (1%) Strand=Plus/Plus Query 37928 TATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGA-CATTCGCA-TGG 37985 |||||| || | ||| |||| ||||||||||| ||| ||||| || ||| ||| Sbjct 227067 TATATAGTTCTTCAAATTCATCACCCCATACATCATCTAAACCTGGGGCA---GCACTGG 227123 Query 37986 AC-ACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCC 38044 | | | || || ||| |||| | || || |||| ||| || | |||||| | || Sbjct 227124 GCGAAAATAAAGTCCAAGGCCCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCC 227183 Query 38045 ATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGC 38104 ||| |||| || |||||| | | | | |||||| || || | ||||| | Sbjct 227184 ATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATAT 227243 Query 38105 TTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTC 38164 | ||| ||||| ||||| || |||||||| || | ||| | | || || |||| Sbjct 227244 CGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAAGAAAAGGGCGAAGGCACCAGGTC 227303 Query 38165 TTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTA 38224 | || | ||| ||||| | | ||| | | || ||||| | | | | |||||| | Sbjct 227304 TCTTGTTACCACCCTGGTCCACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAA 227363 Query 38225 CTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTAC 38284 | || || || | ||||| |||| | ||||||| ||| | | || || || Sbjct 227364 TCAACCCGTTTGAAGTACCGTTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGT 227423 Query 38285 TTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTAT 38344 | || | || | ||||||||| ||| || || | ||| |||| ||| || |||| Sbjct 227424 TGATATGAAGACCAACACCACCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTAT 227483 Query 38345 CAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAG 38404 || | |||||||| ||| ||||||||| || | | || ||||| ||||||||||| Sbjct 227484 CATAAATACCTTCGATAGAGTCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAG 227543 Query 38405 GCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACA 38464 | ||| || || ||||| ||||| || || || || || |||| || || ||||| Sbjct 227544 GATGTGGCGTACCAGCGTTGAATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACA 227603 Query 38465 AATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCC 38524 ||||||| || | | ||| || ||||| | || || |||||||| | || | Sbjct 227604 TCAAATTATAAGTCTTCAGCACAGATTCGATATCGCTACCATGGATACCTAGCGCCACAC 227663 Query 38525 TCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATT 38584 ||||| || ||| || || | |||| | || | ||| || | || | ||||| Sbjct 227664 GCATTACCAAATGCTGAGGACGTTCTGCCACTTCACCGTTCAGTCTTAGCAAGTACGAAC 227723 Query 38585 TTTCTAATGTTTTTATTCCAAAATAACTATA-TGAATAATCTCTATCGTA 38633 || | ||| || | || ||||| |||| || | |||| |||||||| Sbjct 227724 GCTCCAGTGTCTTGAACCCGAAATACGTATACTGGA-AATCCCTATCGTA 227772 Score = 93.3 bits (102), Expect = 4e-14 Identities = 410/632 (65%), Gaps = 33/632 (5%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 226103 TTTTGAGAGATTTCCCAGACGGTTTTGTATAATTCCTTCAATTCTTGTGGCACATTTGGT 226162 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 226163 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 226219 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 226220 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 226277 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | ||||||| || | Sbjct 226278 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAA 226337 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAG--AAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || || || | ||||| || || Sbjct 226338 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCAT-AGTCAAAGAG-TTTCTTAACCC 226395 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 ||| || ||| |||| ||| ||| | ||| ||||| | | ||| || | Sbjct 226396 ATGCTTAACAATGTCCTTTCTTAAGGTT--TCCCAGTCCCACATGCCAAATGGTTTAGCG 226453 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| || ||||||||| | | | | || || Sbjct 226454 TT--CCACATATCGAATTGTAAAATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAAT 226511 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | ||||| || || |||| Sbjct 226512 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTGGCATGGTAAATAGTTT 226571 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC-CAATAAT 37506 |||| |||||| | |||| ||| |||||||| | || || | ||| | ||| | Sbjct 226572 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGACGCAACATC 226630 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||||||||| ||||| | | | || |||||||| ||| |||| || Sbjct 226631 ATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 226690 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATT 37595 ||||| | || |||||||| ||||| Sbjct 226691 TTTCTAGCC---TCGGGAACTGGATAGTAATT 226719 >seq10 Length=720952 Score = 131 bits (144), Expect = 2e-25 Identities = 395/601 (66%), Gaps = 22/601 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 395166 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 395107 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 395106 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 395047 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGT-T 11799 || || || | || || | | ||||| || |||| |||||| ||| | | || Sbjct 395046 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 394987 Query 11800 GCTAGAT--ATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTGT 11853 || | |||||| || ||||| || || ||| | || ||| | || || Sbjct 394986 GCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGGT 394931 Query 11854 TTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATT 11911 | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 394930 GTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAGGTATCGATC 394873 Query 11912 AATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACAT 11971 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 394872 AACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTC 394813 Query 11972 CGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATA 12031 |||||||| | || || || | || |||| | || || ||||| |||||| Sbjct 394812 TTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATA 394753 Query 12032 CCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAGT 12090 || ||| || || ||||| || || | | || || || || | |||| | | || Sbjct 394752 CCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCGT 394695 Query 12091 TAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAA 12146 | || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| | Sbjct 394694 TCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 394635 Query 12147 AACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAA 12206 || || | | | || || || |||||| ||||| ||||| |||||||||| || Sbjct 394634 AAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGAA 394575 Query 12207 C 12207 | Sbjct 394574 C 394574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523716536400