Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq12 113 4e-20 seq9 82.4 8e-11 >seq12 Length=1041327 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || || || | |||||||||||| |||||||||||||| | Sbjct 50968 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51027 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| || || ||||| ||| |||||| | ||| ||||| ||||| Sbjct 51028 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51087 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| |||| | ||| | | || | ||||| | | || || Sbjct 51088 ATACCTTCCTTGTC-TTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 51146 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | ||||| || |||| || || || || ||||||||| Sbjct 51147 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 51195 >seq9 Length=430657 Score = 82.4 bits (90), Expect = 8e-11 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 153632 GGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTC 153691 |||||| || || || || ||||| ||||||||||| |||| | |||||| || ||||| Sbjct 226834 GGCAATAGAAGCTAAATTACAAACTGCAGTTTCGTCCGGGGAGGAATATTCGACGATTTC 226893 Query 153692 CGCACACAAATT-GCTGCATTTTATCAGGCCGCAATTACT-TTGATTGCTTTTGCGGTTA 153749 ||| ||||| | || |||| || || | || | || ||| || | || | |||| Sbjct 226894 ACAACATAAATTAGATG-ATTTGAT-AGTACCTAAGTTCTGTTGGTTTGTCTTCCTGTTA 226951 Query 153750 CAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTC 153787 || |||||||| || | |||| | ||||| || ||||| Sbjct 226952 CATGCGTCCTTATAAACCATGAAAGGTGTACCTGTTTC 226989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062852852000