Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 149 6e-31 >seq10 Length=720952 Score = 149 bits (164), Expect = 6e-31 Identities = 542/841 (64%), Gaps = 17/841 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 395466 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 395407 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 395406 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 395348 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| |||||| || Sbjct 395347 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 395288 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 395287 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 395232 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 395231 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 395172 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 395171 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 395112 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 395111 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 395052 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | | Sbjct 395051 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 394992 Query 13826 CTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 13885 | | || | |||||| || ||||||||| | || | || || | Sbjct 394991 CGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATGG 394932 Query 13886 TTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 13943 | | || |||||||| || ||| | ||||||| | ||||| |||| ||||| || Sbjct 394931 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAGGTATCGAT 394874 Query 13944 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 394873 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 394814 Query 14004 TCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063 | || |||| ||| || || | | | || |||| ||||||||||||||||||| Sbjct 394813 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 394754 Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14123 ||| ||| ||| || ||||| || | | | ||| || || ||| | | ||| Sbjct 394753 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTT 394694 Query 14124 GAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| || Sbjct 394693 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 394634 Query 14181 A 14181 | Sbjct 394633 A 394633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587693263400