Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq12 131 1e-25 seq9 125 5e-24 >seq12 Length=1041327 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || || || || || || ||||| |||||||| ||| Sbjct 482722 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 482663 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| |||| Sbjct 482662 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 482603 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || ||| ||| ||| | || || || || | ||| || Sbjct 482602 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 482543 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || | |||||| || ||||| || | ||| || || ||||||||||| || Sbjct 482542 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 482493 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || ||||| | || || ||||| || ||||| ||||| Sbjct 50968 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 51027 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||| | ||| || || || | ||||| | |||||| || ||| Sbjct 51028 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGA 51087 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| |||||| ||| || | || || || || | ||| || Sbjct 51088 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 51147 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||| || || ||||||||||| || || ||||||||||||||| Sbjct 51148 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 51195 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || | ||||| || || || ||||| |||||||| || Sbjct 50740 CCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 50799 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| | ||||||| ||| || ||||| | ||||| | ||||| || || Sbjct 50800 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 50859 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || |||||| || || || | || || || ||| | ||| || Sbjct 50860 ATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 50919 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||| || || || ||||| |||||||| || |||||||||||| Sbjct 50920 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 50967 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| ||||| || || || | ||||| ||||| || ||||| || ||||| || Sbjct 50512 CCACCCCTCAACCTCAAGACGAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 50571 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| | ||||||| |||||| || || | ||||| | ||| ||||| ||| Sbjct 50572 AGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAGATCAATCTTTGCTGGTCTGGAGGA 50631 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| |||||| ||| || | || || || || | ||| || Sbjct 50632 ATACCTTCCTTGTCTTGAATTTTTGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 50691 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||| || || ||||||||||| || || || |||||||||||| Sbjct 50692 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCATA 50739 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| | |||| || | ||| | |||||| || || || ||||||||||| Sbjct 51424 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 51483 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || |||| ||||||||| || || || || | ||||| | |||||| || || Sbjct 51484 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 51543 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| |||||| ||| || | || ||||||||| | ||| || Sbjct 51544 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 51603 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||||||||| |||| ||| || || ||||| |||||| Sbjct 51604 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 51651 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || || || ||||| || || || ||||| |||||||| || Sbjct 51196 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 51255 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||||| || || || || | ||||| | ||||| || || Sbjct 51256 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 51315 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||||| ||| || | || || || ||| ||| || Sbjct 51316 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 51375 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||||||||| |||| ||| || ||||| || |||||| Sbjct 51376 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 51423 >seq9 Length=430657 Score = 125 bits (138), Expect = 5e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||||||| || ||||| || | ||||| |||||||| |||||||| || Sbjct 62836 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 62777 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| ||||| || ||||| | ||||| | ||||||||| ||| Sbjct 62776 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62717 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| ||| || ||| ||| | || || || || | ||| || Sbjct 62716 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 62657 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355 || || || ||||| ||||| |||| ||| || |||||| Sbjct 62656 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 62618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178383399085