Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737275.1_202016-09- 21] 185 sequences; 12,149,096 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 >seq10 Length=720952 Score = 131 bits (144), Expect = 2e-25 Identities = 486/749 (65%), Gaps = 36/749 (5%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||||| || |||| | ||||| ||||| || ||||| || | Sbjct 395461 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 395402 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903 ||| || || | ||| | | || || || | | | || || || ||| | || Sbjct 395401 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 395343 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961 ||| |||| ||| | ||| || || || || || | ||| || ||| || || Sbjct 395342 CGAAAGCAAC-----CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 395288 Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGAT 93018 | ||||| ||||| | | || |||| ||||| |||||| |||||| | | || Sbjct 395287 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 395231 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTAC 93072 | | || || || | | |||| | || || || ||| |||||| || | | Sbjct 395230 TTCCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTTC 395176 Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132 | || | ||| ||||| ||||||||||| || ||||||||||||| | ||||| Sbjct 395175 AA-ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAA 395117 Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192 || ||| || |||||||| || | || |||| || || | ||| || || || || Sbjct 395116 TTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGC 395057 Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 ||| ||| || ||||| | |||||| | || ||||| || || | | ||| |||| Sbjct 395056 AAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAA 394997 Query 93253 ATTTGCGGAA--TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAA 93310 ||| | | || ||||||| |||||||||| ||||| || | || Sbjct 394996 CAAGGCGTCAGCGTCTTG--GATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT 394939 Query 93311 GGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTA 93370 || | || | || || || || | | | || | || | | || ||||| ||| Sbjct 394938 GGGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTA 394879 Query 93371 TCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAG 93430 ||||| |||| || || ||||||| || | ||| || || |||||||| |||||| Sbjct 394878 TCGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAG 394819 Query 93431 AAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 |||| | || || | || || ||||| || || | || || | |||||||| Sbjct 394818 AAACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTA 394759 Query 93491 ACTATACCATCGGATGCTGCaaaaaaaGC 93519 || ||||| || || || || ||||| || Sbjct 394758 ACAATACCGTCAGAAGCGGCGAAAAAGGC 394730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859512259400