Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737285.1_202016-09-
21] 216 sequences; 12,203,517 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 8e-23
seq9 118 1e-21
seq11 100 3e-16
>seq12
Length=1063814
Score = 122 bits (134), Expect = 8e-23
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || |||||||||| |||||||||||| | ||||||||||||||| |
Sbjct 64261 AAAAATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGAT 64320
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || || || | ||| || || || || || |||| || ||||| ||
Sbjct 64321 GTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTG 64380
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| ||||| ||||||||||| || | ||| || |||||| | | | ||||||
Sbjct 64381 TTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTC 64440
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || |||||||| || || || |||||
Sbjct 64441 GGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 64500
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | ||||||||||||||| | ||| || ||| |
Sbjct 499331 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 499272
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || ||||||| |||||||| || || || |||
Sbjct 499271 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 499212
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | |||||||| || ||
Sbjct 499211 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 499152
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||| || || || || |||||
Sbjct 499151 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 499105
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | ||| || | ||| | ||| || |||||||| | || || || |
Sbjct 64046 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 64105
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || || || || ||| |||| || ||||||||||| |||||||||
Sbjct 64106 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 64165
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | |||||| | ||| ||| | | | |||||||| || ||
Sbjct 64166 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 64225
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || || || || ||||| || |||||
Sbjct 64226 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 64272
Score = 102 bits (112), Expect = 7e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| ||||||| || || || ||||||||||| |||||||| ||||| |
Sbjct 64514 AGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGG 64573
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
||||| | ||| ||| ||| ||||| | | || || || | |||||||||||
Sbjct 64574 ATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTA 64633
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||| || ||||||||||||||
Sbjct 64634 CCGGTCAAAGTCTTAACAAAGATCTGCAT 64662
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || || || || ||||| || | ||| ||||| || || | || || |
Sbjct 64683 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 64742
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| ||||||| |||||||| ||||||||||| |||||||| ||||| | ||
Sbjct 64743 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 64802
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
|||| | ||| ||| | ||| || || | || || || | || |||||||| |
Sbjct 64803 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 64862
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||| || || || ||||||||
Sbjct 64863 CGGTCAAAGTCTTGACGAAAATCTGCAT 64890
>seq9
Length=442966
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| || ||||||||||| ||||| ||||| | ||| || || |
Sbjct 65548 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 65489
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || |||| || || || ||||||| |||||||| || || || ||
Sbjct 65488 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 65429
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| |||| |||||| | | | |||||||| || ||
Sbjct 65428 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 65369
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | |||||||| || ||||| | ||| || |||||
Sbjct 65368 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 65331
>seq11
Length=643353
Score = 100 bits (110), Expect = 3e-16
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||||||||| | ||| || | |
Sbjct 615814 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGT--CAG 615871
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || |||| || || || ||||||| |||||||| || || || |
Sbjct 615872 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 615931
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| |||||||| ||||| | || || | |||||| | | | ||||||| || |
Sbjct 615932 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 615991
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
| || | |||||||| || ||||| | ||| || || |||
Sbjct 615992 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 616032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289989613760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |