Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737285.1_202016-09- 21] 216 sequences; 12,203,517 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 262 5e-65 seq9 140 4e-28 seq2 91.5 2e-13 >seq5 Length=562617 Score = 262 bits (290), Expect = 5e-65 Identities = 889/1367 (65%), Gaps = 36/1367 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| | || ||||| || |||||| || ||| ||| || || || || Sbjct 299511 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 299570 Query 111687 AAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 |||||| | ||| || || |||| | ||||| | ||||| || ||||| || Sbjct 299571 TTGATGTCTCTAAAATATTTTACTC-ACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 299629 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 || ||| ||||||||| ||||||| | |||| | |||||||| || ||| | || || Sbjct 299630 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 299689 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||||| ||| | | |||||||| || || || ||||||||||| || | || Sbjct 299690 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 299749 Query 111866 CATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924 |||||| | | | | ||| || || ||| |||||||| ||| || | | Sbjct 299750 TATCCATAACATTCGTTC-AACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACG 299808 Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984 || | ||||| ||| |||| || || || ||| || || ||||| |||| | ||| Sbjct 299809 GTTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTA 299868 Query 111985 GTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040 | ||| || | | || | || || || |||||||| || ||||| | || Sbjct 299869 ATAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGAT 299927 Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTCTC 112099 || |||| | | ||||| ||| | ||||| || ||| | ||| | ||| | Sbjct 299928 TTTATTGATATTAGGAAGAACCACGGTAAAGAGGAAATTCG-TGCAAGAGATTTGTTCCC 299986 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||||| |||||||| ||||| ||||||||| | || || || | ||| | ||| | | Sbjct 299987 TGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATT 300046 Query 112160 CTTTTGTCCAGACAAG-GCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCC 112218 || | |||| ||| || || ||| | |||| ||||| |||||||| || | Sbjct 300047 ATTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTC 300105 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGT 112278 | || || |||||| ||||| |||| | | ||| | ||| | | | Sbjct 300106 TATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTAT 300162 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | | ||||||| || ||||||||||| | | ||||||| || | Sbjct 300163 GGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATG 300222 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| ||| ||||||||| || || ||||| |||||| || ||| | || Sbjct 300223 CTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCT 300282 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 ||||| | |||| ||| |||||| || ||||| |||||| | || || | | Sbjct 300283 GTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTG 300342 Query 112459 CTCTCCCC------------AAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | | || | | || |||| |||| |||| | | ||| Sbjct 300343 CCTTACCAGCATTCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAAAA 300402 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 || | || ||| || | ||| ||| || || |||||||||| |||||| | |||| Sbjct 300403 AATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAATT 300462 Query 112567 TTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTG 112626 ||||| ||||| || | ||||| ||||||||||| | ||||||| | | |||| Sbjct 300463 ACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGGTG 300522 Query 112627 TCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGA 112686 | ||||||||||| || ||||| || | || |||||||||| || ||||| Sbjct 300523 TTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGCCC 300582 Query 112687 AGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGG 112746 | ||| | || ||||| || || ||||| ||| | | || || || | Sbjct 300583 GTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTGTG 300642 Query 112747 AGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGG 112806 | | || || || |||||||| ||||| || | || ||||| ||||| ||||| Sbjct 300643 AACTAGCTCAGAAGGACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAAGGTA 300702 Query 112807 TGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTC 112865 | || || ||||||||||||| | | ||| | || | || |||||| | || Sbjct 300703 TACTACAGTTTGATATGTGGG-ACCAAAAACCCTACGGCATGTGGGATTGGGACAC-CTT 300760 Query 112866 AAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCA 112922 ||| || | |||| | || | ||| || | | | || || |||||||||||||| Sbjct 300761 AAGAAAAGATATCATGAAGCATGGTGTTAG--AAATTCCTTGACCATGGCACCAATGCCT 300818 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| | ||||| |||||| |||||||||| || ||||| Sbjct 300819 ACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACC 300865 >seq9 Length=442966 Score = 140 bits (154), Expect = 4e-28 Identities = 926/1461 (63%), Gaps = 62/1461 (4%) Strand=Plus/Minus Query 111546 TATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATG 111605 ||||| || ||||||| || ||| ||| | | ||||||| | |||| || Sbjct 243011 TATTTCGGATTCAAGACACTGGAGCGTTCGTACTTGCTAAGACTGAACGGTGAAGTGGCA 242952 Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 ||| || ||| | || | ||||| || ||| | ||||||||||| ||||| || Sbjct 242951 GAACGTCCTCAGCATTTGGTAATGCGTGTGGCGCTAGGTATCCATGGTAGCGATATCGAA 242892 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCA 111722 ||||| || |||| || | |||||| || | || |||| ||||| | ||| Sbjct 242891 TCTGTGCTGAAGACTTATAATTTGATGTC--GTTAAGATAC-TTCACTCACGCTTCCCCA 242835 Query 111723 ACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC 111782 || | |||||||||||||| ||| || |||||||| |||||| | ||||| | Sbjct 242834 ACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTGCCATG 242775 Query 111783 AAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAG 111842 ||||| || || ||| | || ||||| | ||| | | |||||||| || || || Sbjct 242774 AAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTTCCAAA 242715 Query 111843 TGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAG 111901 || |||||| | || | || ||| | | || | || ||| | ||| ||| Sbjct 242714 ACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCC-ACAGGTTCTTATATCGC 242656 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||||| || ||| ||| | || | ||||| ||| |||| || || || || || Sbjct 242655 TGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATACTGC 242596 Query 111962 GCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC-----TATCTT-GA 112015 || ||||| |||| | || || |||| || || || || | |||| || Sbjct 242595 CCGTTATGTGGACCAGGGTG---GTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGGA 242539 Query 112016 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGA 112075 ||||||||| || |||||| | || || | || | | | || ||| | || || Sbjct 242538 GCCATGGCATGCAGATATCTTCGACTTTGTCGATATCAGAAAAACACATGGTAAGGAAGA 242479 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | |||| | ||| | ||| | ||||| ||||| || ||||| |||||||| | | Sbjct 242478 AATTC-GTGCAAGAGATTTGTTCCCTGCTCTATGGATCCCTGATCTTTTCATGAAACGTG 242420 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 || | ||| ||| |||| || | |||| || || || ||| | |||| Sbjct 242419 TTCAAGAGGATGGGCCTTGGACTTTATTTTCACCCAGTGCTGCCCCAGGTTTAGATGATG 242360 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 |||||| || ||||||| || || || ||||| |||| |||| | | Sbjct 242359 TGTGGGGTGATGAATTTGAAGAACTATATACTCGTTACGAAAGAGAAGGTCGTG---GTA 242303 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCT-CAAGTCTCAAACCGAGACTGGT 112313 || | ||| | ||||| | || ||| | |||| | || || || || ||| Sbjct 242302 AAACAATTAAAGCCCAAAAGTTGTGGTATGCCATTTTGCAAG-CACAGACAGAAACAGGT 242244 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 ||||| | ||| |||| || ||||| |||||| |||| || ||| |||| || ||| Sbjct 242243 ACACCTTTCATGGTTTATAAGGACGCATGTAACAGGAAGACAAACCAACAGAACTTAGGT 242184 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 112433 ||||| || ||| | ||| |||||| | |||| | | | ||||| || Sbjct 242183 ACTATCAAATCATCTAACTTATGTTGTGAAATCGTCGAATATTCCTCCCCGGATGAAACT 242124 Query 112434 GCTGTGTGTAACCTCGCATCAATCGCTCTCCC--CA--AGTATGTGGATCCAGA----GA 112485 || || ||||| | || || || || || || || || || || | |||| | Sbjct 242123 GCAGTTTGTAATTTAGCTTCTATTGCCCTACCAGCATTCGT-TGAGGTTTCAGAAGATGG 242065 Query 112486 CAAA-----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAA 112540 ||| | | | ||| || | | | ||||| || | ||| | || | || Sbjct 242064 TAAAACTGCAAGCTATAATTTCGAGAGATTGCACGAGATTGCTAAAGTCATTACTCACAA 242005 Query 112541 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAA 112597 | | ||||||||||| || | |||| || || ||| ||| ||| | || || || Sbjct 242004 CTTGAACAGAGTTATCGACCGTAATTACTATCCAGTTCCCGAG---GCTAGAAATTCAAA 241948 Query 112598 TATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG 112657 ||||| || | || |||| ||| |||||||| ||| | || ||| | || | | Sbjct 241947 TATGAAGCATAGACCTATTGCTCTTGGTGTCCAGGGTTTGGCCGATACTTATATGATGTT 241888 Query 112658 TCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC--AATGCGCGTATATTTGAGACA 112715 || | | ||||| || || ||||| | || || || | || || || || Sbjct 241887 GCGTCTACCCTTTGAATCGGAAGAAGCTCA--AACTCTAAACAAACAAATCTTCGAAACT 241830 Query 112716 ATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAA 112775 || || || || ||||||| || | || ||||| | || ||| |||| Sbjct 241829 ATTTACCATGCTACTCTTGAAGCCTCCTGTGAATTGGCCCAAAAAGAAGGTAAATATTCT 241770 Query 112776 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAG 112835 || ||||| |||||||||||||| | || | | ||||| ||||||| |||| | | Sbjct 241769 ACTTTTGAAGGTTCTCCAGCTTCTAAGGGTATTTTACAATTCGATATGT-GGAACGCTAA 241711 Query 112836 ACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTC 112890 |||| || | || ||||| | || ||| || | || | || | | |||| Sbjct 241710 ACCATTTGGCATGTGGGATTGGGAAAC-CTTAAGAAAGGACATTGTTAA--ACATGGGT- 241655 Query 112891 TTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 112948 | | ||| ||||| ||||||||||||||||| ||||| || | ||||| | || Sbjct 241654 TAAGAAAC--TCTTTGACTATGGCACCAATGCCAACCGCCTCAACTTCCCAAATTCTTGG 241597 Query 112949 TAATAATGAATGCTTTGAACC 112969 | ||||||||||||| ||||| Sbjct 241596 TTATAATGAATGCTTCGAACC 241576 >seq2 Length=804967 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 163546 CTATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGC 163605 ||| || ||| |||||||| | || || || || |||||| ||||||||||| ||||| Sbjct 704980 CTACGGTCGTATTGCGCCAAGGTCAGGCCTGGCAGTGAAAAACGGTATCCAAACCGGTGC 705039 Query 163606 GGGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCAT 163660 |||||| | || || ||||| |||||||| ||||| ||| | ||||||||| Sbjct 705040 TGGTGTTGTCGACAGAGATTACACCGGTGAAGTTAAAGTAGTTTTATTCAATCAT 705094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740723995520