Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737295.2_202016-11- 09] 186 sequences; 12,167,954 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq12 149 6e-31 seq10 105 6e-18 seq9 105 6e-18 >seq12 Length=1050131 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 57431 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 57490 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| || ||||||||||| ||||| ||||||| ||| || || | ||| Sbjct 57491 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 57550 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 57551 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 57610 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 57611 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 57657 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 57203 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 57262 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | |||| Sbjct 57263 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 57322 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 57323 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 57381 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 57382 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 57429 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 57659 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 57718 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | ||| Sbjct 57719 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 57778 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | || ||| ||||| || Sbjct 57779 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 57837 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| |||||||| || || || |||||||| Sbjct 57838 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 57885 Score = 102 bits (112), Expect = 7e-17 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 56975 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 57034 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| | || || || |||||||| ||||| ||||| | ||| || |||| ||| Sbjct 57035 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 57094 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687 | | || ||| | ||| |||| ||| || |||| | | |||||| ||||| | Sbjct 57095 ATAC-CTTCTTTATCTTGA-ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 57152 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | || || || || || || | |||||| || || || ||||| Sbjct 57153 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 57201 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || ||||| | |||||||| || | || | || |||||||||||| ||||| || Sbjct 56744 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 56803 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || |||| | || || || |||||||| ||||| ||||| | |||||||| | | Sbjct 56804 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 56863 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685 |||| | ||||||| | ||| ||| | | | |||| | | ||||| ||||| Sbjct 56864 GGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTC 56922 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 56923 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 56973 >seq10 Length=813872 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || | Sbjct 193076 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 193017 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 193016 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 192957 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 192956 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACT 192897 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || || || Sbjct 192896 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 192859 >seq9 Length=440763 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| || || || || || || |||||||||||||| || | | Sbjct 70408 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 70349 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 70348 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 70289 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 70288 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 70229 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || ||||| Sbjct 70228 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 70191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792551904880