Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737395.2_202016-11- 09] 454 sequences; 12,506,298 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq12 118 9e-22 seq9 84.2 2e-11 >seq12 Length=1034921 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| ||||| ||||| |||||||| ||||| |||||||| ||| | Sbjct 469696 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 469637 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||||||||| || || ||| | || | || ||||| || || Sbjct 469636 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 469577 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| || || || || | | ||| || || || ||| | Sbjct 469576 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 469517 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 |||| |||||| || || ||||| || || ||||| ||||||||||| || Sbjct 469516 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 469467 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19994 CTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAA 20053 ||||||||||| || || |||||||| ||||| |||||||| || || ||| || | Sbjct 67900 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 67959 Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113 ||||| | ||| || || ||| |||| | ||||||||||| || | |||||||| Sbjct 67960 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTA 68019 Query 20114 TCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATG 20173 || |||||| ||| || | | ||| || ||| || ||| || | ||| || Sbjct 68020 TCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATA 68079 Query 20174 GTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || | |||||||| ||||||||||| Sbjct 68080 GTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 68114 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||||||||| || || |||||||| ||||| |||||||| || | Sbjct 67519 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 67578 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| | ||| || || ||| |||| | ||||||||||| || Sbjct 67579 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 67638 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||| || ||| || | | ||| || ||| || ||| Sbjct 67639 ATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 67698 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || || || || || | |||||||| ||||||||||| Sbjct 67699 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67745 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || |||||||||||||| | ||||| ||||| || ||||| ||||| | Sbjct 68116 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 68175 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||| ||| || || ||| |||| | || |||||||| || Sbjct 68176 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGA 68235 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| || || | | | | || || || ||| Sbjct 68236 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAACC 68295 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| || || || || |||| || ||||||||||||||||| Sbjct 68296 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 68342 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 19974 ATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGT 20033 |||| || || || | |||||||| || | || || || || || ||||| || |||| Sbjct 67283 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 67342 Query 20034 AATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGAT 20093 | || || ||| || |||||| | ||| || || ||| |||| | || ||||||| Sbjct 67343 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGTTGAT 67402 Query 20094 CGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAG 20153 | || | ||||| ||||| |||||| ||| || | | ||| || ||| || Sbjct 67403 CTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAG 67462 Query 20154 GTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| || | ||| || || || || || | |||||||| ||||||||||| Sbjct 67463 ATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67517 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||| | ||| | ||||| || || || || || ||||||||||| | Sbjct 68572 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 68631 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||| | || || || ||| | || | || |||||||| || Sbjct 68632 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 68691 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| || || | | | | | |||| || ||| | Sbjct 68692 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 68751 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || |||||||| |||||||| || ||||| ||||| ||||| Sbjct 68752 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 68798 >seq9 Length=448183 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| || || || | || ||||||||||| |||||||| || | Sbjct 74231 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 74172 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||||||||| || || ||| | || | || ||||| || || Sbjct 74171 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 74112 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||| ||| || || | | ||| || || || ||| | Sbjct 74111 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 74052 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 |||| || ||||| || || ||||| || ||||||||| Sbjct 74051 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 74013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419584878371574