Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737395.2_202016-11-
09] 454 sequences; 12,506,298 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 6e-31
seq9 118 1e-21
seq11 100 3e-16
>seq12
Length=1034921
Score = 149 bits (164), Expect = 6e-31
Identities = 177/240 (74%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || ||||||| || |||||||||||| | ||||||||||||||| |
Sbjct 68331 AAAAATTTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGAT 68390
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || || || | ||| || ||||| || ||| ||||||| || || ||
Sbjct 68391 GTTGTAGTCAGACAAGGTTCTACCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTG 68450
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| ||||| |||||||| ||||| | ||||| | ||| ||| ||| |||||
Sbjct 68451 TTGATCCGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTC 68510
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | ||||||||||| || || | ||| || ||||||||||||||
Sbjct 68511 GGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 68570
Score = 143 bits (158), Expect = 2e-29
Identities = 175/239 (73%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| ||||||||| ||||| ||||| || || || | |
Sbjct 68104 AAAATTTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATG 68163
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|||||||| || || | || ||||| || || || |||| || ||||||||
Sbjct 68164 TTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATCAATCTTTGT 68223
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|||||||||||||||||||| ||||| | |||||| | ||| ||| | ||| |||||||
Sbjct 68224 TGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATAGTGTCA 68283
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || || || || ||||| || |||||
Sbjct 68284 GAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 68342
Score = 122 bits (134), Expect = 8e-23
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || || ||||||| || |||||||||||| | ||||||||||||||| |
Sbjct 67875 AAAAATTTGCATACCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGAT 67934
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || || || || | ||| || || || || || |||| || ||||| ||
Sbjct 67935 GTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTG 67994
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| ||||| ||||||||||| || | |||||| |||||| | | | ||||||
Sbjct 67995 TTGATCCGGAGGGATACCTTCTTTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTC 68054
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || |||||||| || || || |||||
Sbjct 68055 GGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 68114
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| |||||||| | ||||||||||||||| | ||| || ||| |
Sbjct 469696 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 469637
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| || || || ||||||| |||||||| || || || |||
Sbjct 469636 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 469577
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | || || | |||||| | | | |||||||| || ||
Sbjct 469576 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 469517
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || | ||| || || || || |||||
Sbjct 469516 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 469470
Score = 120 bits (132), Expect = 3e-22
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| |||||||||||| | ||||||||||||||| | |
Sbjct 67507 AAAATTTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATG 67566
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| || || || || | ||| || || || || || |||| || ||||| ||
Sbjct 67567 TTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGT 67626
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
||||| ||||| ||||||||||| || | ||| || |||||| | | | ||||||
Sbjct 67627 TGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCG 67686
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || || || || |||||||| || || || |||||
Sbjct 67687 GAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67745
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || ||||| | ||| || | ||| | ||| || |||||||| | || || || |
Sbjct 67291 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 67350
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | ||| || || || || ||| |||| || |||||||| ||||||||||||
Sbjct 67351 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 67410
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | |||||| |||||| | | | |||||| | || ||
Sbjct 67411 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 67470
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | || || || || || || |||||||| || || || |||||
Sbjct 67471 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 67517
Score = 102 bits (112), Expect = 7e-17
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859
|||| || || || || ||||| || | ||| ||||| || || | || || |
Sbjct 68591 CAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTA 68650
Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919
|||| || ||| ||||||| |||||||| ||||||||||| |||||||| ||||| | ||
Sbjct 68651 GCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAA 68710
Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979
|||| | ||| ||| | ||| || || | || || || | || |||||||| |
Sbjct 68711 TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTAC 68770
Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||| || || || ||||||||
Sbjct 68771 CGGTCAAAGTCTTGACGAAAATCTGCAT 68798
>seq9
Length=448183
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| || ||||||||||| ||||| ||||| | ||| || || |
Sbjct 74231 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 74172
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || |||| || || || ||||||| |||||||| || || || ||
Sbjct 74171 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 74112
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| |||| |||||| | | | |||||||| || ||
Sbjct 74111 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 74052
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | |||||||| || ||||| | ||| || |||||
Sbjct 74051 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 74014
>seq11
Length=675464
Score = 100 bits (110), Expect = 3e-16
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||||||||| | ||| || | |
Sbjct 627390 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGT--CAG 627447
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
|||| ||| | || |||| || || || ||||||| |||||||| || || || |
Sbjct 627448 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 627507
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
| |||||||| ||||| | || || | |||||| | | | ||||||| || |
Sbjct 627508 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 627567
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
| || | |||||||| || ||||| | ||| || || |||
Sbjct 627568 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 627608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288655947440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |