Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737395.2_202016-11- 09] 454 sequences; 12,506,298 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq15 111 2e-19 >seq15 Length=1083828 Score = 111 bits (122), Expect = 2e-19 Identities = 209/302 (69%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 172454 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 172512 ||||||||| ||||| | | |||||| |||||||||| ||||||| ||| ||||| | Sbjct 472610 AGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATG-GGGTTCA 472552 Query 172513 CTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGG 172572 || || |||| ||| ||| | || || ||||||||||||||||||| ||| || | Sbjct 472551 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 472492 Query 172573 CTCAATATATCGAC-TGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAA 172631 || |||| | ||| || ||| || || || |||||||| | || ||||| | || Sbjct 472491 CTAAATACA-AGACGTGCGATGACGACTATACTGGACAAGGTATTGATCAATTGAAACAG 472433 Query 172632 ACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAAT 172691 ||| ||| || | | || || | |||||| || | || | ||||| Sbjct 472432 GTTATACATAAACTAAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAAC 472373 Query 172692 GTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTC 172751 | || | |||| ||||||| | | || || ||||||| ||| |||| || |||||| Sbjct 472372 CCAGCTGATTTTGACAAAATGGCTTTGCCGCCATGCCATATTTTTTCACAGTTCTATGTC 472313 Query 172752 AG 172753 || Sbjct 472312 AG 472311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632486010621520