Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737395.2_202016-11- 09] 454 sequences; 12,506,298 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12 122 2e-22 seq9 120 7e-22 seq11 98.7 2e-15 >seq12 Length=1034921 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||||| ||| ||||||||| | || || ||| Sbjct 469494 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 469553 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || ||| Sbjct 469554 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 469613 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| |||| |||||| |||| || || |||||||| ||| Sbjct 469614 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 469673 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 469674 TTGGTCTTGAGA 469685 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||||| || || ||| || ||| Sbjct 68567 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 68508 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || ||||| || ||||| || Sbjct 68507 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCGGATCAACAG 68448 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| ||||| |||||| | |||||||| || || ||| | || |||||| || Sbjct 68447 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGATGGTAGAACCTTGTCTGACTACAACATC 68388 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || || |||||||||||| | || |||||||| Sbjct 68387 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGACT 68353 Score = 100 bits (110), Expect = 7e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 68100 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 68041 Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 || |||| |||| ||||||| |||||||| || ||||| || ||| | || Sbjct 68040 CGTCAAAAGTAAAA--TTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATT 67983 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || || || ||||| | |||||||| || || ||| | || |||||| |||| || || Sbjct 67982 TTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAA 67923 Query 206362 TCTACTCTTCACCTTGTTTTGAGACT 206387 |||||||||||| | || |||||||| Sbjct 67922 TCTACTCTTCACTTGGTGTTGAGACT 67897 Score = 98.7 bits (108), Expect = 2e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 67731 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 67672 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || ||||||||||| |||||||| || ||||| || ||| | || || Sbjct 67671 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 67612 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | |||||||| || || ||| | || |||||| |||| || || || Sbjct 67611 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 67552 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 |||||||||| | || |||||| Sbjct 67551 TACTCTTCACTTGGTGTTGAGA 67530 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/203 (71%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || ||||| || || || || | || || ||| ||| ||||| | || Sbjct 67503 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 67444 Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301 || |||| |||| ||||||| || ||||| ||| || || |||||| | || Sbjct 67443 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 67386 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 || ||||| ||||| | |||||||| || || || | || ||||| | || || ||| Sbjct 67385 TTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAG 67326 Query 206362 TCTACTCTTCACCTTGTTTTGAG 206384 || |||||||||||||| ||||| Sbjct 67325 TCCACTCTTCACCTTGTCTTGAG 67303 Score = 95.1 bits (104), Expect = 3e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 |||||||| || | |||||||||||| || || |||| || ||||||| ||| || || Sbjct 68353 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 68412 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| |||||||| ||||| ||||| | || |||||| Sbjct 68413 CCATCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 68454 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || ||||| || || || || | || || ||| ||||||||| | Sbjct 68334 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 68275 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||| || |||||||| || ||||| ||| || || |||||| | Sbjct 68274 CGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATT 68215 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || || ||||| ||||||| || || || || | ||||| ||| | ||||| Sbjct 68214 GATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAA 68155 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||||||||| | || | || |||||| Sbjct 68154 AGAGTCTACGTTGCATTTGGTGTTGAGA 68127 >seq9 Length=448183 Score = 120 bits (132), Expect = 7e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || |||||||||||||| ||| ||||||||| | Sbjct 74013 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 74072 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 || || ||| |||||||||||| || ||||| || || ||| |||||| | Sbjct 74073 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 74132 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || ||||| |||||||| || || || ||| | || |||||| | || || Sbjct 74133 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 74192 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || ||| | ||| | || |||||| Sbjct 74193 AGAATCCACTTTGCACTTAGTCTTGAGA 74220 >seq11 Length=675464 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 627592 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 627533 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| || || ||| |||||| | ||||| || || ||| Sbjct 627532 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 627473 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || |||||||| || || ||| | | || |||||| |||| || || || ||| | || Sbjct 627472 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 627413 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 627412 TTGGTCTTGAGA 627401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181813925496134