Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737415.2_202016-11-
09] 57 sequences; 11,871,177 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq12 134 1e-26
seq9 131 1e-25
seq11 109 4e-19
seq53 105 5e-18
>seq12
Length=1033972
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||||| ||||| || |||||||| || || ||||
Sbjct 52899 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 52958
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || ||||| || || ||| | |||||||||||||| || || |||
Sbjct 52959 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 53018
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| |||||| | || || | || | |||||||||| ||| ||
Sbjct 53019 ATACCTTCCTTGTCTTG-AATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 53077
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||||||| || || || | || || ||||| || |||||
Sbjct 53078 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 53125
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || || ||||| ||||| ||||| || || |
Sbjct 483273 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 483214
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 483213 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 483154
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | |||||||||| ||| |||
Sbjct 483153 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 483094
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || ||||| || || ||||| || || || || || ||||| ||
Sbjct 483093 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 483044
Score = 122 bits (134), Expect = 7e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 53619 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 53678
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || |||||||| || ||||||
Sbjct 53679 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCT 53738
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | |||||| ||| ||| || || || ||||||||
Sbjct 53739 TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 53798
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || |||| ||||| || || || |||||
Sbjct 53799 TTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 53830
Score = 105 bits (116), Expect = 5e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 53370 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 53429
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || |||||||| || ||||||
Sbjct 53430 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCT 53489
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | |||||| ||| ||| || || || ||||||||
Sbjct 53490 TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 53549
Query 29755 TTGCCAGT 29762
|| || ||
Sbjct 53550 TTCCCTGT 53557
Score = 102 bits (112), Expect = 6e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 54555 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 54614
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || || ||||| || ||||||
Sbjct 54615 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 54674
Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| |||||| | || || | || | || || ||| ||| ||||| | ||||| ||
Sbjct 54675 TG-AATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 54733
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || || || || || ||||||||
Sbjct 54734 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 54766
>seq9
Length=437561
Score = 131 bits (144), Expect = 1e-25
Identities = 162/219 (74%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || | |||||||||||||||||||| || || |
Sbjct 44728 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 44669
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 44668 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 44609
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || |||||||| ||| |||| |||||| | || | |||||||||| ||| ||
Sbjct 44608 ATACCTTCCTTGTCTTG-AATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 44550
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
||| | ||| || || || ||||| || || || |||||
Sbjct 44549 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 44511
>seq11
Length=666521
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || || || | || |||||||| | |||||||| ||||| ||||| || || |
Sbjct 615177 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 615236
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | || || | ||| || |||||| | ||||||||||| || || || ||
Sbjct 615237 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 615296
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || |||||| | || | ||||||||| ||| |||
Sbjct 615297 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 615356
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| || || ||||| ||
Sbjct 615357 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 615394
>seq53
Length=323
Score = 105 bits (116), Expect = 5e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | ||| | ||||| || || |||||||| ||||| | | || | | ||
Sbjct 188 AGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 129
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|| || || || || ||| | ||||||||||| ||||| || |||||||| || ||||||
Sbjct 128 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCT 69
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | ||| |||||| | || | |||||| ||| ||| || || || ||||||||
Sbjct 68 TGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 9
Query 29755 TTGCCAGT 29762
|| || ||
Sbjct 8 TTCCCTGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385218932393037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |