Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737445.2_202016-11- 09] 81 sequences; 11,901,903 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq10 118 1e-21 >seq10 Length=713793 Score = 118 bits (130), Expect = 1e-21 Identities = 528/830 (64%), Gaps = 21/830 (3%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 ||||| || ||| |||||||||||| ||||| || || || || | || || || ||| Sbjct 369311 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 369252 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| ||||| || || |||| | |||||||| | | || || | | ||| Sbjct 369251 TCCATGAAATCGAAGGGGTTTTCGACATTGTAGTATTTCTTGTTACCGAAAGCGACCAAC 369192 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 16123 | ||| || || || || || | || || |||||||| ||| |||||| |||| || Sbjct 369191 AGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAAA 369132 Query 16124 TTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATA 16183 ||| || | || || || | ||| ||| || | || || || ||| || Sbjct 369131 GCAACTGGTAAGGCGTCCAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACAAT- 369073 Query 16184 TCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATACAAGC 16239 | || | || | | | ||||| | || || |||| | || || Sbjct 369072 --TTTTTCAACGATGGCT-GGGTCTGGTTTGTTCTTCAAATGGGCGAACAACAAGCATGC 369016 Query 16240 AAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGG 16299 ||| || ||||| |||||||| |||| || || ||||| ||||| || | ||| || Sbjct 369015 AAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAACCGGG 368956 Query 16300 CATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACC 16359 ||| | |||| ||||| | ||| || || | |||||| ||||| || || || | ||| Sbjct 368955 CATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGACACC 368896 Query 16360 TTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatcca 16419 ||||| | |||||| ||||| | || ||||| || | || ||||| Sbjct 368895 TTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAATCCA 368836 Query 16420 ttttttagcccaatttgctttttgtttAACACAGTTC----ATGTTCTCTATTGCATTAA 16475 | || |||||| | || | | | || | ||| ||| | | || ||||| | Sbjct 368835 TCTTAAAGCCCATTCGGCCT----TCTCACCGATTTCTGGGATGGTGTGAATGGCATTGA 368780 Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535 | || | | ||||||| || || |||||||| || | || || ||| Sbjct 368779 ACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAAGTATCGATCAACAAGGAGTAAGTTT 368720 Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595 | || |||||||| || || || || ||||| || || | | || || | |||| Sbjct 368719 CAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGGAATTT 368660 Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655 | ||||| | | | || |||| | |||||||| ||||| || || || ||| || | Sbjct 368659 GGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGCGGCGA 368600 Query 16656 AAAACGCAAGTA-TGTGTTTAATAAAAtttttttCGTTATCTGAAAGT---TTTAACCAG 16711 |||| ||||| | | || ||| ||| | | ||||| || | | || |||| Sbjct 368599 AAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTCCAG 368541 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGC 16761 ||| | ||| || || ||||| | ||||| | ||||| |||||||| Sbjct 368540 TCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAAAGAAGC 368491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511531706600