Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737445.2_202016-11- 09] 81 sequences; 11,901,903 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 199 4e-46 seq9 176 4e-39 seq10 134 1e-26 >seq5 Length=535491 Score = 199 bits (220), Expect = 4e-46 Identities = 423/629 (67%), Gaps = 2/629 (0%) Strand=Plus/Minus Query 38006 CATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTT 38065 ||| || ||| || || | ||| || | |||||| | ||||| |||| || |||||| Sbjct 277739 CATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTC 277680 Query 38066 TGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAG 38125 | | | | ||| || || || ||||| || | | |||||| |||||||||| Sbjct 277679 TTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCAG 277620 Query 38126 CGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAA 38185 | ||||||||||| | |||| | | || || |||||||||| ||| ||||| | || Sbjct 277619 CATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCAA 277560 Query 38186 TATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGT 38245 ||| | | |||||||| | | | | |||||| | || ||| ||||| | |||| Sbjct 277559 CATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGT 277500 Query 38246 TTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCAC 38305 || |||| | || |||| ||| | | || || ||| || | || || |||| Sbjct 277499 TTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCAC 277440 Query 38306 CTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGT 38365 | ||| ||| || || ||||| |||| || || || || | || || || ||| || Sbjct 277439 CAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGT 277380 Query 38366 CATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 | ||||| || | | | |||||| ||||||||||| |||||| ||||| || | Sbjct 277379 CCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTGA 277320 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 | || || ||||| || || | || ||||| |||| | ||||| ||||||| Sbjct 277319 ACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAAG 277260 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 || | || ||||| | ||||| || ||||| | || ||||| | | ||||||||| | Sbjct 277259 CAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGAC 277200 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAA 38605 ||| | || | || | | |||| ||| || ||| || ||||| | |||| Sbjct 277199 GTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCAA 277140 Query 38606 AATAACTATA-TGAATAATCTCTATCGTA 38633 ||||||| || |||| ||||||| || || Sbjct 277139 AATAACTGTACTGAA-AATCTCTGTCATA 277112 Score = 167 bits (184), Expect = 2e-36 Identities = 531/815 (65%), Gaps = 15/815 (2%) Strand=Plus/Minus Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873 ||||| | || ||||||| ||| ||||| || || || | ||| ||||||||||| Sbjct 278949 GATGCAGCTTGGGTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAA 278890 Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933 ||||||||||| || ||||| | || || | || | | ||| || ||| Sbjct 278889 AAATGCATACTTGTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGA 278830 Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993 |||||| ||| | || | ||||||||||| | | ||| ||||| || || Sbjct 278829 GATTGATCAATATAGACAGAACGATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATT 278770 Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATA 37050 |||||||| || || |||| | || | | | ||| | | | || |||||| Sbjct 278769 TCCCAAACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACGTTTGGTAAGCCTTGAATG 278710 Query 37051 GAACCATTATGT---AACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACT 37106 || ||||| ||| | || | || | ||| || | | || ||| ||| | | Sbjct 278709 GAGCCATTTTGTGTAATCAGA----TACTGTTTCATACCCTCATCCCAAATACCTAAATC 278654 Query 37107 TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCT 37166 | | || | || || || || || || ||||| || || || ||||| || | | Sbjct 278653 AACCAAGTCACGCAGTAAGTAAGGGTTCACGACCTGGAATTCACCGGATAAGACACGACG 278594 Query 37167 TGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGT 37226 | || |||||| ||| |||||| | | ||||||| || |||||||| ||||| Sbjct 278593 GGAGTACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGT 278534 Query 37227 AGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATG-TGTATTAATTC 37285 |||||||||||||||||||| || | | |||||| | ||||| | || | || Sbjct 278533 GGATGCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATC 278474 Query 37286 TCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTT-TAACCACATATCATAT 37344 | || || || | | ||||||||| | | || ||||| || |||||||||| | Sbjct 278473 TTTTCTTAAGGT-GTCCCAATCCCA-CATGCCGTAGGGTTTTTGGTCCCACATATCAAAC 278416 Query 37345 TGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTA 37404 ||||| ||||||| | || ||||| | | | || || || || |||| | | | Sbjct 278415 TGTAGTATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGA 278356 Query 37405 GCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 |||||||| ||| || ||| | | ||||| ||| || ||||| || ||||| |||||| Sbjct 278355 GCTAGTTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTT 278296 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 | | ||||| || ||| |||| | | || | || || ||||| | | Sbjct 278295 AGCAAACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGA 278236 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| | | | || ||||||||| || |||| ||| | || |||| || Sbjct 278235 CCTTGAACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACA 278176 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATT 37619 || || ||||| ||| || | | | |||| ||| Sbjct 278175 GGGTAGTAATTACGATCAATGACTCTGTTTAAATT 278141 >seq9 Length=428367 Score = 176 bits (194), Expect = 4e-39 Identities = 1077/1698 (63%), Gaps = 74/1698 (4%) Strand=Plus/Plus Query 36982 TTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT--- 37038 |||||||| || ||||| || ||||| |||| || || | | | ||| | || | Sbjct 228957 TTTTGAGAGATTTCCCAGACGGTTTTGTATAGTTCCTTCAATTCTTGTGGCACATTTGGT 229016 Query 37039 AAATGTTGAATAGAACCATTATGTAACACAATTG--TATTCTTT-ATGTCATTATTCCAC 37095 || ||||||||||||||| ||| |||| |||| ||| || || || ||| Sbjct 229017 AAGCCTTGAATAGAACCATTTTGTGT---AATTAGATATTGTTTCATACTATCATCCCAA 229073 Query 37096 ATATTTCTACTT--ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAG 37153 ||| | | | | || || | | || | |||||| ||||| || || || |||| Sbjct 229074 ATAC--CCAGGTCGACTAAATCACGTAGTAAATATGGATTAACAACTTGGAATTCACCAG 229131 Query 37154 ATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTA 37213 | | || | | | || || || || |||||| | | | ||||||| || | Sbjct 229132 ACAGGACACGACGAGAGTACATGTTTGAGGTCACTGGTTCGAAGCATTCATTATAACCAA 229191 Query 37214 ATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAG--AAGGCTATTTCTCAATCC 37271 ||||| || || || || || ||||||||||| || || || | ||||| || || Sbjct 229192 GAATTTGGGAAGTTGAGGCGGTTGGCATTGGTGCCAT-AGTCAAAGAG-TTTCTTAACCC 229249 Query 37272 ATGTGTATTAATTCTCTTTTTTA--GTTCATTCCAATCCCATAAATCTGTTGGGTT--CT 37327 |||| || ||| |||| ||| ||| | ||||||||| | | ||| || | Sbjct 229250 ATGTTTAACAATGTCCTTTCTTAAGGTT--TCCCAATCCCACATGCCAAATGGTTTAGCG 229307 Query 37328 TTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCAT 37387 || ||||||||| |||||| |||||| ||| ||||||||| | | | | || || Sbjct 229308 TT--CCACATATCGAATTGTAAAATACCCTTAGAAGCTGGAGAACCTTCAAAAGTAGAAT 229365 Query 37388 AAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTT 37447 | || | ||| || | ||| || | ||| || | |||| || || |||| Sbjct 229366 ATTTACCTTCTTTTTGGGCCAATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTT 229425 Query 37448 CGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCC-CAATAAT 37506 |||| |||||| | |||| ||| |||||||| | || || | ||| | ||| | Sbjct 229426 CGAAGATTTGTTTGTTTAGAGTTTGAGCTTCTTC-CGATTCAAAGGGTAGACGCAACATC 229484 Query 37507 ATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA- 37565 ||| | ||| ||||||||||| ||||| | | | || |||||||| ||| |||| || Sbjct 229485 ATATAAGTATCGGCCAAACCCTGGACACCAAGAGCAATAGGTCTATGCTTCATATTTGAA 229544 Query 37566 --TCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTA 37623 ||||| | || |||||||| ||||| || || | | | || | | || | Sbjct 229545 TTTCTAGCC---TCGGGAACTGGATAGTAATTACGGTCGATAACTCTGTTCA-AGTTGTG 229600 Query 37624 ACTAGT-ATTTTCGTAAT-TATTCTCAACTTGTCGAACATAAATACGTT--ATTATTAAC 37679 | || | | ||| | ||| | | | | || ||||| || || || | | ||| | Sbjct 229601 AGTAATGACTTTAGCAATCTCGTGTAATCTC-TCGAAATTA--TAGCTTGCAGTTTTACC 229657 Query 37680 AAATTTA-----CTCAACGAA-------------ATAGATCCTAGATTACATACAGCAAC 37721 | || ||||||||| ||||| ||| |||||| || ||| Sbjct 229658 ATCTTCTGAAACCTCAACGAATGCTGGTAGGGCAATAGAAGCTAAATTACAAACTGCAGT 229717 Query 37722 TTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCC 37781 |||||| | | ||| | || || ||| | |||| ||| | || || || Sbjct 229718 TTCATCCGGGGAGGAATATTCGACGATTTCACAACATAAATTAGATGATTTGATAGTACC 229777 Query 37782 CAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCC 37841 || || ||| || | || | ||||| | || ||||| | || | || || || Sbjct 229778 TAAGTTCTGTTGGTTTGTCTTCCTGTTACATGCGTCCTTATAAACCATGAAAGGTGTACC 229837 Query 37842 TTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT 37901 | |||| | || || | | ||| | | ||| || || ||||||| | | ||| Sbjct 229838 TGTTTCTGTCTGTGCTTGCAAAATGGCATACCACAACTTTTGGGCTTTAA---TTGTTTT 229894 Query 37902 A--AtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACA 37959 | | |||| | |||||| |||||| || | ||| |||| ||||| ||| Sbjct 229895 ACCACGACCTTCTCT--TTCGTAACGAGTATATAGTTCTTCAAATTCATCACCCCACACA 229952 Query 37960 TCGCATAATCCTGGA-CATTCGCA-TGGAC-ACATTAGAGACCATTCTTCATCTTTTTCT 38016 || ||| ||||| || ||| ||| | | | | || ||| |||| | || Sbjct 229953 TCATCTAAACCTGGGGCA---GCACTGGGCGAAAACAAAGTCCAAGGCCCATCCTCTTGA 230009 Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076 || |||| ||| || | |||||| | ||||| |||| || |||||| | | | | | Sbjct 230010 ACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCACGAATT 230069 Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGT 38136 ||||| || || | ||||| | | ||| ||||| ||||| || |||||||| Sbjct 230070 TCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGC 230129 Query 38137 TCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACT 38196 || | ||| | | || || ||||| || | ||| ||||| | | ||| | | Sbjct 230130 TCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCCACATAACGGGCA 230189 Query 38197 GTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGAT 38256 || ||||| | | | | |||||| | | || || || | ||||| |||| | Sbjct 230190 GTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCG 230249 Query 38257 ATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316 ||||||| ||| | | || || || | || | || | ||||||||| ||| Sbjct 230250 ATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTGCAGTTTTG 230309 Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATT 38376 || || | ||| |||| ||| || |||||| | |||||||| ||| ||||||||| || Sbjct 230310 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 230369 Query 38377 GGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGA 38436 | | || ||||| |||||||||||| ||| || || ||||| ||||| || || Sbjct 230370 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 230429 Query 38437 GATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATA 38496 || || || |||| || || ||||| ||||||| || | | ||| || ||| Sbjct 230430 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 230489 Query 38497 TCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATT 38556 || | || || |||||||| | || | ||||| || ||| || || | |||| | | Sbjct 230490 TCGCTACCATGGATACCTAGCGCCACACGCATTACCAAATGCTGAGGACGTTCTGCCACT 230549 Query 38557 TTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA- 38615 | | ||| || | || | ||||| || | ||| || | ||| ||||| |||| Sbjct 230550 TCACCGTTCAGTCTTAGCAAGTACGAACGCTCCAGTGTCTTGAATCCGAAATACGTATAC 230609 Query 38616 TGAATAATCTCTATCGTA 38633 || | |||| |||||||| Sbjct 230610 TGGA-AATCCCTATCGTA 230626 >seq10 Length=713793 Score = 134 bits (148), Expect = 1e-26 Identities = 397/602 (66%), Gaps = 24/602 (4%) Strand=Plus/Minus Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680 |||| || || ||||| || || |||||||||||||||| || | ||| || ||| Sbjct 369029 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 368970 Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740 || ||||| |||||||||| |||| ||||| | ||| || || | ||||| ||||| Sbjct 368969 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 368910 Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCT-T 11796 || || || | || || | | ||||| || |||| |||||| ||| | | | | Sbjct 368909 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 368850 Query 11797 GTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTG 11852 | || || |||||| || ||||| || || ||| | || ||| | || | Sbjct 368849 GCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTC----TCACCGATTTCTGGGATGG 368795 Query 11853 TTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTAT 11910 | | || || || || | ||| || ||||| || || | | || ||||| || Sbjct 368794 TGTGAATGGCATTGAACAAGAATTCA--CTTTCTTTAGGGTCCTTGATGTAAGTATCGAT 368737 Query 11911 TAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACA 11970 || || || |||| || ||||||||||| || ||||| || || ||||||| Sbjct 368736 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 368677 Query 11971 TCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAAT 12030 |||||||| | || || || | || |||| | || || ||||| ||||| Sbjct 368676 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 368617 Query 12031 ACCATCACTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAG 12089 ||| ||| || || ||||| || || | | || || || || | |||| | | | Sbjct 368616 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTG-GAAATGAAAAATCTCTCGT-TCTCG 368559 Query 12090 TTAAT----TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145 || || || | ||| |||| | ||| || || ||||| | ||||||| ||||||| Sbjct 368558 TTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAG 368499 Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205 ||| || | | | || || || |||||| ||||| ||||| |||||||||| | Sbjct 368498 AAAGAAGCTTCGGCACGCTTGTAGGCTTGCCAGATTTCATGGTACTTGATAGGGAAAAGA 368439 Query 12206 AC 12207 || Sbjct 368438 AC 368437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524325618640