Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737445.2_202016-11-
09] 81 sequences; 11,901,903 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 2e-22
seq9 105 2e-17
seq11 95.1 3e-14
>seq12
Length=1037699
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474
|||| ||||||||| ||||| ||||||||||| | |||||||| | || || || |||
Sbjct 60738 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 60797
Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534
||||| || ||||| ||||| || || | | |||||||| ||| ||| |||||
Sbjct 60798 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 60857
Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594
|| ||||| || ||| ||| || | ||||| | | ||| || || | || ||
Sbjct 60858 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 60917
Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || || || || |||||||||||
Sbjct 60918 GTCTTACCTGTCAGTGTCTTGACAAAAATTTG 60949
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471
||||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || ||
Sbjct 60963 AGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTA 61022
Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531
|||||||| || ||||| || || || || | | ||| || |||||| || ||||||
Sbjct 61023 CCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCT 61082
Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591
|| ||||| || || ||| || | ||||| | | ||| || || | ||
Sbjct 61083 TTATCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTT 61142
Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || |||||||| || ||||||||
Sbjct 61143 ATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTG 61177
Score = 118 bits (130), Expect = 2e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||||| ||| || || ||
Sbjct 61421 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 61480
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| |||||||| ||||| ||||| | | ||| || || ||| || |||||
Sbjct 61481 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 61540
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| || || ||| ||| |||| ||||| | | ||| || || || |||||
Sbjct 61541 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 61600
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || | ||| || ||||| || ||
Sbjct 61601 GGTTTTACCGGTCAAAGTCTTAACAAAGATCTG 61633
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| |||| ||||||
Sbjct 490697 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACA 490756
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || || |||||||| ||| | || ||||||
Sbjct 490757 TCCAAAAGGAATCTACTCTACACTTGGTCTTGAGA 490791
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
|| ||||| || || | ||| || |||| || || || || |||||||| ||||| |||
Sbjct 61212 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 61271
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|| || || | | || || || ||| ||| ||||| || ||||| || |||
Sbjct 61272 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 61331
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
||| |||| ||||| | | ||| || || | || || |||||||| || || ||
Sbjct 61332 ACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 61391
Query 199613 TTCACAAAAATTTG 199626
|| |||||||||||
Sbjct 61392 TTGACAAAAATTTG 61405
>seq9
Length=428367
Score = 105 bits (116), Expect = 2e-17
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | ||| || || ||||| | ||||||||||| ||| || || ||
Sbjct 60198 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 60139
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 60138 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 60079
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||||||| ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 60078 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 60019
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | ||| || ||||||
Sbjct 60018 GGTCTTACCAGTCAAAGTCTTGACAAAA 59991
>seq11
Length=663997
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | || | ||| || |||||||||| ||||||||||| | ||| || ||
Sbjct 615577 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 615636
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || || |||||
Sbjct 615637 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 615696
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 615697 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 615756
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAA 199620
|||||||| || | ||| || || ||
Sbjct 615757 GGTCTTACCAGTCAAAGTCTTAACGAA 615783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920376500427
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