Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737505.2_202016-11-
09] 169 sequences; 12,104,055 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq12 116 4e-21
>seq12
Length=1056709
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| |
Sbjct 56127 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 56186
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | | || || || || || || || | ||||||| || ||||| |||||
Sbjct 56187 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 56246
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| |||||| ||| | |||| |||| ||||| | | || ||
Sbjct 56247 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTG-TCGATAGTGTCAGAAGATTCAAC 56305
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || ||||| || || |||||||| |||||
Sbjct 56306 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 56353
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||| | ||||| || ||||| || ||||| |||||||| || ||| | | || ||
Sbjct 57173 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 57232
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||| || || || ||||||||| || ||||| ||||| || || ||||||||
Sbjct 57233 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 57292
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|||||| ||| | ||||| ||| ||| || | | || ||||| | || | ||||
Sbjct 57293 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 57351
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||||| ||| || || |||||||||||
Sbjct 57352 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 57382
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | |||| |||||||||||| | |||||||||||| ||||| || ||||| |
Sbjct 56593 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 56652
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||| | | || || || || || || || | ||||||| || ||||| |||||
Sbjct 56653 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 56712
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| ||||| |||| |||| || | ||||| | | || ||
Sbjct 56713 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAAC 56771
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || || || |||||||| || ||||| |||||
Sbjct 56772 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 56819
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 126903 ACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962
|||||||||| | |||||||||||| ||||| || ||||| || ||| | | || |
Sbjct 56381 ACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTT 56440
Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022
| || || || || || | ||||||| || ||||| ||||| || || ||||||||
Sbjct 56441 CCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTT 56500
Query 127023 TGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081
||||| |||| |||| || | ||||| | | || || || | ||| | ||
Sbjct 56501 GAATTTTACTTTTGACGTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 56559
Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || |||||||| || ||||| |||||
Sbjct 56560 TTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 56591
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||| | | ||| ||||| || || ||
Sbjct 55701 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 55760
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | ||||||| ||||| || ||||| || || |||||||| |||||| |||
Sbjct 55761 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 55820
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||||| | | || || || | ||| | || || || ||||| ||
Sbjct 55821 ACGTTG-TCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGT 55879
Query 127096 TTTTACAAAAATCTGCAT 127113
|| |||||||| |||||
Sbjct 55880 CTTGACAAAAATTTGCAT 55897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499795504560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |