Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737505.2_202016-11- 09] 169 sequences; 12,104,055 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq12 123 2e-23 seq9 93.3 3e-14 >seq12 Length=1056709 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| | || |||||| || ||||| ||||| || Sbjct 56126 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 56185 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || |||||||||||||| | || |||||| | || Sbjct 56186 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 56245 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||||| ||||| | Sbjct 56246 AATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATAGTGTCAGAAGATTCAA 56304 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || |||||||| | || || ||||| || |||||| Sbjct 56305 CCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 56354 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| | || |||||| || ||||| ||||| || Sbjct 56592 ACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGA 56651 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||| ||| || |||||||||||||| | || |||||| | || Sbjct 56652 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 56711 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| ||| || | ||| | |||||| ||||| | Sbjct 56712 AATACCTTCCTTGTCTTGAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 56770 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||||| ||||| || || || |||||| Sbjct 56771 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 56820 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || ||||| || ||||| |||||||| || || Sbjct 56927 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 56986 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| || | || || |||||||| ||||| | ||| |||||| | || Sbjct 56987 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 57046 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| | | ||| | || | |||||| ||||| | Sbjct 57047 GATACCTTCCTTGTCCTGGATTTTC-GACTTAACGTTATCGATCGTGTCGGAGGATTCAA 57105 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| |||||||| || || || || ||||||||||||||| Sbjct 57106 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 57155 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | | || ||| | ||||| ||| ||| || || ||||||||||| || Sbjct 57155 ACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGA 57214 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| || | || || |||||||| ||||| | || |||||| | || Sbjct 57215 CAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 57274 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||||||| | | ||| | ||| | ||| ||| ||||| | Sbjct 57275 GATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCGATGGTATCGGAAGATTCAA 57333 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || |||||||| || || || || || || ||||||||| Sbjct 57334 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 57383 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 33539 ACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||||||| | || |||||| || ||||| ||||| || || || | |||| | Sbjct 56381 ACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTT 56440 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 ||| ||| || |||||||||||||| | || |||||| | || | |||||| ||||| Sbjct 56441 CCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTT 56500 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 |||||| ||| || | ||| | |||||| ||||| || || | || || || Sbjct 56501 GAATTTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTC 56559 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || ||||||| ||||| || || || |||||| Sbjct 56560 TTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 56592 Score = 102 bits (112), Expect = 5e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| ||||| | || || | || |||||| ||| ||||| || ||||| || Sbjct 55667 GTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTC 55726 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 || || || | | || || | ||| || |||||||||||||| | ||||| ||| | Sbjct 55727 CGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGG 55786 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 || | |||||| ||||| ||||||| | | ||| | ||| | ||||| |||| Sbjct 55787 AGGAATACCTTCCTTGTCTTGAATTTTC-GACTTAACGTTGTCAATAGTGTCAGAAGATT 55845 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || || |||||||| | || || ||||| || |||||| Sbjct 55846 CAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 55898 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | |||||||| || ||||| || ||||| |||||||| || || Sbjct 55898 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 55957 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || || | ||| || || ||||||||||| | ||| ||||| | || Sbjct 55958 CAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 56017 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||| || ||| || ||| || | ||| | |||||| ||||| | Sbjct 56018 GATACCTTCTTTATCTTGAATCTT-ACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 56076 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||||| ||||| || || || |||||| Sbjct 56077 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 56126 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| |||||||| || ||||| |||||||| |||| Sbjct 486564 CACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGG 486505 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || |||||||| || || ||||| ||||| | || || || | | Sbjct 486504 ACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 486445 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | ||||| ||||| Sbjct 486444 GAATACCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTCAATAGTGTCAGAAGATTCA 486386 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| ||||| || || || || || ||||| Sbjct 486385 ACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 486336 >seq9 Length=403879 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || || || || | |||| |||||||| |||||||| || || Sbjct 45101 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 45042 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | |||| |||||||| || || ||||| ||||| | || || || | || Sbjct 45041 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 44982 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| || || | |||| ||| | ||||| ||||| | Sbjct 44981 GATACCTTCCTTGTCTTGAATCTT-TGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 44923 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | ||||| || ||||| || || || || ||||| Sbjct 44922 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 44883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703322972480