Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737545.2_202016-11-
09] 220 sequences; 12,326,525 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 167 5e-36
seq10 152 1e-31
seq11 138 3e-27
seq9 132 1e-25
seq173 100 7e-16
>seq12
Length=1058210
Score = 167 bits (184), Expect = 5e-36
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | |||||||| ||||||||||| || |||
Sbjct 60988 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAGTTGCTTACCA 61047
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | ||||||||||| ||||| || ||||||||||| |||||||| |||
Sbjct 61048 GCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTTATCTTGAATCTTACTTTTG 61107
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| || ||| |||||||| || |||||||| || || || |||
Sbjct 61108 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 61167
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 61168 TTGACGAAAATTTGCAT 61184
Score = 167 bits (184), Expect = 5e-36
Identities = 177/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | || | ||| || ||||| ||||||||||| ||||| |||
Sbjct 61183 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 61242
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||||||||||||| ||||| || || |||||||| | || |||||||| |||
Sbjct 61243 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 61302
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTT-ACATTTTCTACGGTATCGCTAGGTTC 104508
|| || ||||| || || ||||| ||| ||||| || || || | || ||| || |||
Sbjct 61303 GGAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTC 61361
Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| || |||||||| || || || ||||| || || || |||||
Sbjct 61362 AACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61412
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||||||| || || |||||||| || || || |||||||| || || |||
Sbjct 61639 ATACCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCA 61698
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || ||||||||||||||||| || || || ||||| || | || |||||||| |||
Sbjct 61699 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 61758
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || | || || || || | ||||||| || |||
Sbjct 61759 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 61818
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | ||| || || ||||| || | || || || || ||||||||
Sbjct 61819 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 61868
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || |||||||| ||||| || || |||||||| ||||||||||| || ||
Sbjct 60760 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 60819
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| | || || || || ||||| || ||||| || || ||||| || | ||
Sbjct 60820 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 60879
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || || || ||| |||||||| || ||||||||||| || |||||
Sbjct 60880 ACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 60939
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 60940 TTGACAAAAATTTGCAT 60956
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| || || || || |||||||| | ||||||||||||||||| || || ||
Sbjct 61444 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCG 61503
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | |||||||||||| ||||| || ||||| || ||||| || || | ||
Sbjct 61504 GCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATTTTCGACTTA 61563
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | || ||| | ||| ||||||| || || || ||||| || | ||
Sbjct 61564 ACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGATGGTTTTACCGGTCAAAGTC 61623
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 61624 TTAACAAAGATCTGCAT 61640
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|||| |||||||| || || || || ||||| || | ||||||||| ||||| | |||
Sbjct 494092 TGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGC 494033
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||| ||||| || || ||||| || || || |||||
Sbjct 494032 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTG 493973
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || || || ||| || || || |||||||||||||| ||
Sbjct 493972 GACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTT 493913
Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563
| || || || || || ||||| |||
Sbjct 493912 AAAGTCTTGACGAAAATTTGCATCTTG 493886
>seq10
Length=734839
Score = 152 bits (168), Expect = 1e-31
Identities = 377/564 (67%), Gaps = 26/564 (5%)
Strand=Plus/Plus
Query 268745 TACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTA 268804
||||| | |||| |||||||| ||||| | |||||| | ||| ||||| | || |
Sbjct 391351 TACAAGCGTGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATC 391410
Query 268805 ATAGATTGGAAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCG 268861
|| ||||| || || ||| |||| || ||| || || || |||||||
Sbjct 391411 CATGACTGGAACAACAGAATGAACGAGAACGAGAGATTTTTCATTTCCAGAGTTCTTGCC 391470
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
||||| || | | ||| ||||| ||||| ||||| | || || || |||| ||
Sbjct 391471 TTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAA 391530
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
|| || ||||| || || | |||| ||||| ||||| || || |||||||||||
Sbjct 391531 GTCCAAATTCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCAC 391590
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-G 269040
|| || | ||| | || || |||||||| || | || | ||||||| |
Sbjct 391591 TCTGAAACTTACTCCTTGTTGATCGATACTTACATCAAGGAC-----CCTAAAGAAAGTG 391645
Query 269041 ACTATTTTCTTCTATGAGA-----ACTAT----GGACTGTGTGAGaaaaaaaTCTGAATG 269091
| | | || ||| ||| | || || | | | ||||||| | |||||
Sbjct 391646 AAT-TCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGAGAAGG----CCGAATG 391700
Query 269092 GGCTCTGAAATGGATAAACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGC 269148
|||| | | |||||| | || | |||||| || ||||| ||||||| |||||
Sbjct 391701 GGCTTTAAGATGGATTCAAGACGCTGACGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGC 391760
Query 269149 CGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAG 269208
| | | |||||| | || || || || || |||||| | || || |||||||| || ||
Sbjct 391761 CTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAG 391820
Query 269209 AGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACA 269268
||| | ||||| || ||||| || || ||||||||||| | || ||||||||||| ||
Sbjct 391821 AGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 391880
Query 269269 CTGCGACTTCGCTTGTTTATTATT 269292
| |||||| || || || || ||
Sbjct 391881 CACCGACTTTGCATGCTTGTTGTT 391904
>seq11
Length=671968
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | |||||| || ||||| || || || || ||||||
Sbjct 623843 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 623902
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||||||||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 623903 GATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 623962
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || || ||||| | || ||||| || | ||| || || |||
Sbjct 623963 GGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCA 624022
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
|| || | || || |||||||||||
Sbjct 624023 ACTTCCAAAGTGATGGTCTTACCAGT 624048
>seq9
Length=428989
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | || | |||| || || || |||||||| ||||| || ||||||
Sbjct 58679 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 58620
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||||||||| | ||| || |||||||| || | || ||||| |||||
Sbjct 58619 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 58560
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || ||||| || | || || || |||
Sbjct 58559 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 58500
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| || | || || ||||||||||| | || || |||||
Sbjct 58499 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 58459
Score = 100 bits (110), Expect = 7e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 104396 GTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATT 104455
|||||||||||||| | ||| || |||||||| || | || ||||| ||||| || ||
Sbjct 58364 GTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATA 58305
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| || || |||||||||| || ||||| || | || || || ||| || ||
Sbjct 58304 CCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCC 58245
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || ||||||||||| | || || |||||
Sbjct 58244 AAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 58210
>seq173
Length=1270
Score = 100 bits (110), Expect = 7e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 104396 GTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATT 104455
|||||||||||||| | ||| || |||||||| || | || ||||| ||||| || ||
Sbjct 6 GTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATA 65
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| || || |||||||||| || ||||| || | || || || ||| || ||
Sbjct 66 CCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCC 125
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
| || || ||||||||||| | || || |||||
Sbjct 126 AAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395154495760
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