Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737545.2_202016-11-
09] 220 sequences; 12,326,525 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 2e-22
seq9 120 7e-22
seq11 98.7 2e-15
seq173 91.5 3e-13
>seq12
Length=1058210
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||||| ||| ||||||||| | || || |||
Sbjct 493914 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 493973
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 493974 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 494033
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| |||| || || |||||||| |||
Sbjct 494034 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 494093
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 494094 TTGGTCTTGAGA 494105
Score = 104 bits (114), Expect = 6e-17
Identities = 148/207 (71%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || ||||| || || || || | || || ||| ||||||||| |
Sbjct 60948 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 60889
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| || |||||||| || ||||| ||| || ||| |||||| |
Sbjct 60888 TGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATT 60829
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|| || ||||| ||||| | |||||||| || || || | || ||||| | || ||
Sbjct 60828 GATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAA 60769
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAG 206384
||||| |||||||||||||| |||||
Sbjct 60768 GGAGTCCACTCTTCACCTTGTCTTGAG 60742
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 61170 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 61111
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||||||||| |||||||| || ||||| || ||| | || ||
Sbjct 61110 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 61051
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| | |||||||| || || ||| | || |||||| |||| || || ||
Sbjct 61050 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 60991
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|||||||||| | || ||||||
Sbjct 60990 TACTCTTCACTTGGTGTTGAGA 60969
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| |||||||| || || ||| || |||
Sbjct 61637 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 61578
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || || || || || ||||| || || || ||
Sbjct 61577 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 61518
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| ||
Sbjct 61517 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 61458
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||||||||| | || ||||||
Sbjct 61457 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 61425
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 61398 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 61339
Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| |||| |||| ||||||| || ||||| ||| || || |||||| | ||
Sbjct 61338 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 61281
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| ||||| ||||| ||||||| || || || || | ||||| ||| | |||||||||
Sbjct 61280 TTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAG 61221
Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385
||||| | || | || ||||||
Sbjct 61220 TCTACGTTGCATTTGGTGTTGAGA 61197
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || |||| || ||||||| ||| || || ||
Sbjct 61425 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 61484
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||| |||||||| ||||| ||||| | || ||||||
Sbjct 61485 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 61524
>seq9
Length=428989
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 58458 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 58517
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 58518 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 58577
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| | || ||
Sbjct 58578 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 58637
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || ||| | ||| | || ||||||
Sbjct 58638 AGAATCCACTTTGCACTTAGTCTTGAGA 58665
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/160 (73%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 58209 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 58268
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 58269 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 58328
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTG 206337
||||| || || ||||| |||||||| || || || |||
Sbjct 58329 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTG 58368
>seq11
Length=671968
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 624048 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 623989
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | ||||| || || |||
Sbjct 623988 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 623929
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || ||| | | || |||||| |||| || || || ||| | ||
Sbjct 623928 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 623869
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 623868 TTGGTCTTGAGA 623857
>seq173
Length=1270
Score = 91.5 bits (100), Expect = 3e-13
Identities = 117/160 (73%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 161 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 102
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 101 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 42
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTG 206337
||||| || || ||||| |||||||| || || || |||
Sbjct 41 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTG 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181817468742620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |