Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737635.2_202016-11- 09] 200 sequences; 11,843,585 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq12 141 8e-29 seq9 136 3e-27 seq11 116 3e-21 >seq12 Length=1008795 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || || ||||| ||| | Sbjct 456858 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 456917 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| || || ||||||||||| ||||||||||| || Sbjct 456918 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 456977 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || ||| | || | ||||| ||| Sbjct 456978 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 457037 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| ||||| || |||| || || ||| ||||| | || ||| Sbjct 457038 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGGT 457088 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| ||||||||||| | || | ||||| ||| | || Sbjct 59518 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 59459 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || ||||||||||||||||| ||||| || || |||||| Sbjct 59458 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 59399 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || |||||||| || ||| |||| || | || | || ||||||||| Sbjct 59398 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 59339 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| || || |||||| ||||| Sbjct 59338 ATTCAGAAGGAGTCCACCTTACAT 59315 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| ||||| ||||||||||| ||||| | || || ||| || || Sbjct 59290 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59231 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || ||||| || |||||||| ||||| || || |||||| Sbjct 59230 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59171 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| |||| || | ||| | || || |||||| Sbjct 59170 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59111 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || ||| ||||| | || ||| Sbjct 59110 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGT 59063 >seq9 Length=429888 Score = 136 bits (150), Expect = 3e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 |||||| || ||||| || ||||| || ||||| | ||||| ||| | | || || | Sbjct 62930 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 62989 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| ||| |||||||||||||| ||||| ||||| || |||||| | | Sbjct 62990 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 63049 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || || || || || || | ||| | || || |||||||||||||| Sbjct 63050 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 63109 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| | || ||||| ||| ||||| | || ||| Sbjct 63110 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGT 63149 >seq11 Length=645705 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22228 TTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTG 22287 || ||||| ||||| || ||||| || ||||| | ||||| ||| | | || ||| | Sbjct 614270 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 614211 Query 22288 GACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTT 22347 ||| || |||| || || ||||||||||| ||||| ||||| || |||||| | | Sbjct 614210 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 614151 Query 22348 ATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAA 22407 || ||||| || || || || || || | || | || || |||||||| ||||| Sbjct 614150 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 614091 Query 22408 GAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||| ||||||| || ||| |||| Sbjct 614090 GAATCCACTTTACATTTGGTCTTGAGATT 614062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726976913000