Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737635.2_202016-11-
09] 200 sequences; 11,843,585 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq12 179 8e-40
seq9 158 3e-33
seq11 150 4e-31
>seq12
Length=1008795
Score = 179 bits (198), Expect = 8e-40
Identities = 147/179 (82%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194926 CTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCA 194985
||||| |||||||||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 58785 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 58844
Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045
||||| || |||||||| || || || | || ||| |||||||||||||| ||||| |||
Sbjct 58845 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 58904
Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
||||||||||| ||| ||||| ||||| ||||| ||| ||| || || ||||| ||
Sbjct 58905 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTAC 58963
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || || | ||||| || | |||||||| || ||||| |||||||| | || ||
Sbjct 59297 TCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGT 59356
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| ||||||||||| || ||||| | || |||||| |||||||| || ||
Sbjct 59357 TCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACC 59416
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| ||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 59417 TTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAA 59476
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || ||||| | |||||
Sbjct 59477 TGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 59518
Score = 134 bits (148), Expect = 3e-26
Identities = 165/223 (74%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||||||||| || || ||||| || ||||| || | |||| |
Sbjct 59069 TCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 59127
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| ||||||||||| || ||||| | | ||||| |||||||| || |
Sbjct 59128 TTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATAC 59187
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||| || ||||| ||| ||||| || || ||||| || ||| || || |
Sbjct 59188 CTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTA 59247
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || |||||||| || || || | |||||
Sbjct 59248 AAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 59290
>seq9
Length=429888
Score = 158 bits (174), Expect = 3e-33
Identities = 165/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977
||| | |||||| || | ||| | |||||| ||||||||||| ||||| || | |||| |
Sbjct 63143 TCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 63085
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| || ||||| | |||||||| || ||||| | || ||||||||| || || || |
Sbjct 63084 TTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATAC 63025
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||| ||||||||||| ||| |||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 63024 CTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 62965
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || || ||
Sbjct 62964 AAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 62931
>seq11
Length=645705
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | || | |||||| || ||||| || ||||| || | |||||
Sbjct 614058 TCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGT 614117
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || ||||| | || ||||||||| || || || ||
Sbjct 614118 TCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACC 614177
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||| || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 614178 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAA 614237
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || |||||||| || |||||
Sbjct 614238 AGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 614270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109478756953400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |