Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737645.2_202016-11-
09] 190 sequences; 12,081,046 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq12 131 1e-25
seq9 125 5e-24
>seq12
Length=1042953
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || || || || || ||||| |||||||| |||
Sbjct 490692 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 490633
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||| ||||| || ||||| | ||||| | ||||||||| ||||
Sbjct 490632 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 490573
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| | || || || || | ||| ||
Sbjct 490572 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 490513
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| | |||||| || ||||| || | ||| || || ||||||||||| ||
Sbjct 490512 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 490463
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || ||||| | || || ||||| || ||||| |||||
Sbjct 61377 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 61436
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| | ||| || || || | ||||| | |||||| || |||
Sbjct 61437 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 61496
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || || || || | ||| ||
Sbjct 61497 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 61556
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 61557 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 61604
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| ||||| || || || | ||||| ||||| || ||||| || ||||| ||
Sbjct 60921 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGAC 60980
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| | ||||||| ||| || || || | ||||| | ||| ||||| |||
Sbjct 60981 AGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGA 61040
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || || || || | ||| ||
Sbjct 61041 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACC 61100
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || ||||||||||| || || |||||||||||||||
Sbjct 61101 TCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 61148
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| ||| || || || ||||| || || || ||||| |||||||| ||
Sbjct 61149 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61208
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | ||||||| ||| || ||||| | ||||| | ||||| || ||
Sbjct 61209 AAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGG 61268
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| |||||||| || ||| || || || || | || || || ||| | ||| ||
Sbjct 61269 ATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 61328
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||| || || || ||||| |||||||| || ||||||||||||
Sbjct 61329 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 61376
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | |||| || | ||| | |||||| || || || |||||||||||
Sbjct 61833 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 61892
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||||| || || || || | ||||| | |||||| || ||
Sbjct 61893 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 61952
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| |||||| ||| || | || ||||||||| | ||| ||
Sbjct 61953 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 62012
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || ||||||||||| |||| ||| || || ||||| ||||||
Sbjct 62013 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATA 62060
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || ||||| || || || ||||| |||||||| ||
Sbjct 61605 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61664
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||||| || || || || | ||||| | ||||| || ||
Sbjct 61665 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 61724
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||||| ||| || | || || || ||| ||| ||
Sbjct 61725 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 61784
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| || ||||||||||| |||| ||| || ||||| || ||||||
Sbjct 61785 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCATA 61832
>seq9
Length=440252
Score = 125 bits (138), Expect = 5e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || ||||| || | ||||| |||||||| |||||||| ||
Sbjct 69389 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 69330
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| ||||||| ||||| || ||||| | ||||| | ||||||||| |||
Sbjct 69329 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 69270
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| ||| || ||| ||| | || || || || | ||| ||
Sbjct 69269 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 69210
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15355
|| || || ||||| ||||| |||| ||| || ||||||
Sbjct 69209 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 69171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178361328790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |