Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737645.2_202016-11- 09] 190 sequences; 12,081,046 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq12 149 6e-31 seq11 105 6e-18 seq9 105 6e-18 >seq12 Length=1042953 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || | ||| |||||||| |||||||| || | | Sbjct 61605 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61664 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| || ||||||||||| ||||| ||||||| ||| || || | ||| Sbjct 61665 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGG 61724 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||| || ||| | | | | ||||||| ||||| ||| Sbjct 61725 ATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACC 61784 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 61785 TCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 61831 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| |||||| ||| || |||||||| ||||| | | Sbjct 61377 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 61436 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| ||||| |||||||| ||||| ||||| | || || || | |||| Sbjct 61437 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 61496 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | ||||| ||||| || Sbjct 61497 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 61555 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 61556 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61603 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||| | ||| | |||||| || |||||| |||||||||||||| | | Sbjct 61833 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 61892 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || ||||||||||| ||||| ||||| | || || || | ||| Sbjct 61893 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 61952 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | | | |||| | | || ||| ||||| || Sbjct 61953 ATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 62011 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || |||||||| |||||||| || || || |||||||| Sbjct 62012 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62059 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 || ||||| | |||||||| || | || | || |||||||||||| ||||| || Sbjct 60918 TTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCC 60977 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | || |||| | || || || |||||||| ||||| ||||| | |||||||| | | Sbjct 60978 GACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGA 61037 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTC 35685 |||| | ||||||| | ||| ||| | | | |||| | | ||||| ||||| Sbjct 61038 GGAATACCTTCCTTGT-CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTC 61096 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | || || || ||||| |||| || || ||||| || ||||| Sbjct 61097 AACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61147 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||||||||| || | ||| |||||||| |||||||| || | |||||||| | Sbjct 61161 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCA 61220 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || || |||||||| ||||| ||||| | ||| || |||| ||| | | || ||| Sbjct 61221 TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATAC-CTTCTTT 61279 Query 35642 TCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 | ||| | || ||| || |||| | | |||||| ||||| ||||| | || | Sbjct 61280 ATCTTGA-ATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTA 61338 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || || || || | |||||| || || || ||||| Sbjct 61339 TAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61375 >seq11 Length=666468 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||| ||||||||||| || |||||||| |||||||| || | Sbjct 618778 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 618837 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 618838 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 618897 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 618898 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACT 618957 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || || || Sbjct 618958 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 618995 >seq9 Length=440252 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| || || || || || || |||||||||||||| || | | Sbjct 69389 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 69330 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| ||||| ||||| | || ||||| | || Sbjct 69329 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 69270 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | | | | ||||| ||||| || Sbjct 69269 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 69210 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 |||| ||||| || ||||| |||||||| || ||||| Sbjct 69209 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 69172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792529365200