Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737645.2_202016-11- 09] 190 sequences; 12,081,046 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12 161 1e-34 seq9 114 1e-20 seq11 100 3e-16 >seq12 Length=1042953 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| |||| |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 61149 CCACCTCTCAGTCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61208 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || || || || || ||||||||||| | ||| ||||| || || Sbjct 61209 AAGGTTCTACCA-TCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGG 61267 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 61268 GATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 61327 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || |||| |||||| |||||||||||||| Sbjct 61328 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61375 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | ||| || || ||||||||||| ||||||||||| | | Sbjct 61605 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 61664 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || ||||| || || ||||| ||||| | ||| ||||| || || Sbjct 61665 AA-GGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 61723 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || ||||| || || || | |||||||| ||||| || Sbjct 61724 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 61783 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||||||||| ||||| ||||| || || ||||| Sbjct 61784 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 61831 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || ||||| | || ||| || | |||||| || ||||||||||| |||||||||||| | Sbjct 490692 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 490633 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || ||||| ||||| | || || || || || Sbjct 490632 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 490574 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||| || || ||||| ||| | ||||| || ||||| || Sbjct 490573 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 490514 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 490513 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 490462 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | | ||| || |||| ||||| ||||| ||||||||||| || | | Sbjct 61833 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 61892 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || ||||| || || ||||| ||||| | || ||||| || || Sbjct 61893 AGCGTTCT-ACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 61951 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | || ||||| ||||| || Sbjct 61952 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAAC 62011 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||||||||| ||||| || |||||||| ||||| Sbjct 62012 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 62059 Score = 118 bits (130), Expect = 1e-21 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 ||| || ||||| || ||||| ||||||||||| |||||||| | || || | | | | Sbjct 60935 CAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA-T 60993 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || || || ||||||||||| | ||||| || || || || ||||| || | Sbjct 60994 CTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGT 61053 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| || || ||| | ||||| || ||||| || || || || || | Sbjct 61054 CTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATAG 61113 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || | || || || ||||||||||| Sbjct 61114 TCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61147 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || |||||| | || | ||| || || || |||||||| || || | | Sbjct 61377 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 61436 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | || | | | ||| || || || || || ||||||||||| | || ||||| || || Sbjct 61437 AGCGTTCT-ACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 61495 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || ||||||||||| || || ||| | ||||| || ||||| || Sbjct 61496 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAAC 61555 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || | || || || ||||||||||| Sbjct 61556 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61603 >seq9 Length=440252 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | |||||||| ||||||||||||||||| | | Sbjct 69389 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 69330 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | ||| || | || || || ||||| ||||| | || || || || || Sbjct 69329 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 69271 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| ||| ||||| ||| | ||||| || ||||| || Sbjct 69270 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 69211 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || ||||| || || ||| Sbjct 69210 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 69171 >seq11 Length=666468 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | |||| |||||||||||||| ||||||||||| Sbjct 618778 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 618837 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| ||||| | || || || || || Sbjct 618838 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 618897 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||||| || | ||||| || ||||| || Sbjct 618898 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTATCAATGGTGTCAGAAGATTCAACT 618957 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 || | ||| ||||| ||||| || ||||| |||||||| Sbjct 618958 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 618995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397199678800