Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737655.2_202016-11- 09] 100 sequences; 12,027,543 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15 167 2e-36 >seq15 Length=1110990 Score = 167 bits (184), Expect = 2e-36 Identities = 423/644 (66%), Gaps = 31/644 (5%) Strand=Plus/Plus Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCTTTAAAATC 96971 ||||| || || || | ||| ||||| | ||| | || ||| || || ||||| Sbjct 432849 CATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTTAACTTGAAATC 432908 Query 96972 ATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT 97031 |||||| | || | || || ||||||| | ||||| || || ||| ||| || Sbjct 432909 ATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGT 432968 Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091 || ||| | | ||||||||||| | ||||| || ||||| || ||||| || Sbjct 432969 GGTTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATG 433028 Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151 ||| || || || || | | || || | || ||||| | ||| || | || ||| Sbjct 433029 AATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATA 433088 Query 97152 GCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACA 97211 ||||||||||| || || || | ||||||||| || | ||| || || || Sbjct 433089 TGATGCAATGTTAAATGGTACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCA 433148 Query 97212 GGAAAG-----------------CTT-TCCATC---------ACACACATAAAACTGACT 97244 ||||| ||| ||| || || ||||| ||||| Sbjct 433149 TGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGA 433208 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304 || | ||| || || ||||| |||||||| || ||| ||||| |||| ||| Sbjct 433209 AAAAATATGGCATGGCGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCAT 433268 Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATC 97364 | |||||||||||| || ||||| | || ||| ||| | ||| || |||||||| Sbjct 433269 AATGATTCTTCTATCGTAGGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATC 433328 Query 97365 AACGCCTTCTCCACCATAATTGTGCTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTC 97422 || |||| |||| ||| | || | | || |||| |||| || |||||||||||| Sbjct 433329 AATACCTTGTCCAGTATAGTCGT-CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTC 433386 Query 97423 CATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTA 97482 ||||| ||||||||||| || || || |||||| ||| ||||| ||| || | |||| Sbjct 433387 CATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTA 433446 Query 97483 TCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526 |||||||| | ||||||||| | |||||||| | ||||| Sbjct 433447 TCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 433490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783577357000