Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737765.2_202016-11-
09] 122 sequences; 12,239,423 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq12 109 5e-19
>seq12
Length=1039400
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| || || || | |||||||||||| |||||||||||||| |
Sbjct 53490 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 53549
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| || || ||||| ||| | |||| | ||| ||||| |||||
Sbjct 53550 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 53609
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| |||| | ||| | | || | ||||| | | || ||
Sbjct 53610 ATACCTTCCTTGTC-TTGAATTTTCGACTTAACGTTGTCGATAGTGTCAGAAGATTCAAC 53668
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| | ||| | ||||| || |||| || || || || |||||||||
Sbjct 53669 CTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCATA 53717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063243502400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |