Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737785.2_202016-11- 09] 58 sequences; 12,061,677 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10 152 5e-32 >seq10 Length=726941 Score = 152 bits (168), Expect = 5e-32 Identities = 543/841 (65%), Gaps = 17/841 (2%) Strand=Plus/Minus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 385722 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 385663 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 385662 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 385604 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| |||||| || Sbjct 385603 GTTACCGAAAGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 385544 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 385543 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 385488 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 385487 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 385428 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 385427 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 385368 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 385367 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 385308 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | | Sbjct 385307 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 385248 Query 13826 CTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTG 13885 | | || | |||||| || ||||||||| | || | ||| || | Sbjct 385247 CGTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCAATTTCTGGGATGG 385188 Query 13886 TTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAAT 13943 | | || |||||||| || ||| | ||||||| | ||||| |||| ||||| || Sbjct 385187 TGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAGGTATCGAT 385130 Query 13944 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 385129 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 385070 Query 14004 TCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAAT 14063 | || |||| ||| || || | | | || |||| ||||||||||||||||||| Sbjct 385069 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 385010 Query 14064 ACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTT 14123 ||| ||| ||| || ||||| || | | | ||| || || ||| | | ||| Sbjct 385009 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTT 384950 Query 14124 GAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| || Sbjct 384949 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 384890 Query 14181 A 14181 | Sbjct 384889 A 384889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588453023120