Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737785.2_202016-11- 09] 58 sequences; 12,061,677 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10 196 4e-45 >seq10 Length=726941 Score = 196 bits (216), Expect = 4e-45 Identities = 559/852 (66%), Gaps = 18/852 (2%) Strand=Plus/Minus Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298 ||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| || Sbjct 385722 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 385663 Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357 || | || || || |||||||| ||||| || || || | ||||| | ||| || Sbjct 385662 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 385603 Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417 || | ||| || | || || ||| || || || || | || ||| |||| | || Sbjct 385602 TTACCGAA-AGCGACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 385544 Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474 ||| || || | || || |||| |||| ||| || | | ||||| || Sbjct 385543 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 385487 Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534 || || || |||| || | || | | || |||||| || || | Sbjct 385486 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 385427 Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594 | ||||| || || ||||| || ||||||||||||||||| | |||| |||||| Sbjct 385426 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 385367 Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654 ||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| || Sbjct 385366 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 385307 Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714 || || || || | ||||| | || |||||| || |||| || || ||| || Sbjct 385306 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 385247 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 | | ||||| |||||| |||| ||||| | || || | || || || || Sbjct 385246 GTCAGCGTCTTGGATCCATCTTAAAGCCCATTCGGCCTTCTCACCAATTTCTGGGATGGT 385187 Query 4775 GTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTAT 4831 || || || || || |||| ||||| || | ||||| | || || || || || Sbjct 385186 GTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAGGTATCGAT 385130 Query 4832 TAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCA 4891 | | | || ||||||| || |||||||| || || || || ||||| || | Sbjct 385129 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 385070 Query 4892 TCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTAT 4951 | || |||| | ||| |||||| | | || |||| || |||||||| || || || Sbjct 385069 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 385010 Query 4952 ACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTT 5011 ||||||| || || ||||| || | ||| || || || | |||| || Sbjct 385009 ACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGTT 384950 Query 5012 AAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAA 5068 | | || ||||||| | | ||| |||| ||||||| ||||||| | ||||| || Sbjct 384949 CATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGAA 384890 Query 5069 CGACGCTTCCGC 5080 || ||||| || Sbjct 384889 AGAAGCTTCGGC 384878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049298129314