Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737875.1_202016-09-
21] 177 sequences; 12,063,403 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq12 174 4e-38
seq9 159 8e-34
seq11 158 3e-33
seq2 91.5 4e-13
>seq12
Length=1048513
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| ||
Sbjct 495428 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 495369
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 495368 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 495309
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || || | || ||
Sbjct 495308 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 495249
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 495248 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 495210
Score = 147 bits (162), Expect = 5e-30
Identities = 153/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 66460 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 66519
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||||||||| || || ||||| | | ||||| || || || |||||||||||
Sbjct 66520 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 66579
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| |||||
Sbjct 66580 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 66639
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
|| || || |||||||| ||
Sbjct 66640 GGTTTTACCGGTCAAAGTCTT 66660
Score = 145 bits (160), Expect = 2e-29
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| |||
Sbjct 65777 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 65836
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
|||||||| ||||| || || || || | || ||| ||||| || |||||||||||||||
Sbjct 65837 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 65896
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
||||| || || ||| || || || ||||| || | ||| || |||| || ||
Sbjct 65897 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 65956
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||| || || | || | ||||||
Sbjct 65957 GTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 65991
Score = 132 bits (146), Expect = 1e-25
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 66004 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 66063
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||||| ||||| ||||| || || | || ||||| || || || |||||||| ||
Sbjct 66064 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 66123
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| ||||| || || || || ||||| || | ||| || |||| || ||
Sbjct 66124 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 66183
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | |||||| | ||| | ||||||
Sbjct 66184 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 66219
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||| || | ||||| || || || | |||||||| | || |||||
Sbjct 66686 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 66745
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| |||||||||||||| || || ||||| | || |||||| || || || |||||||||
Sbjct 66746 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 66805
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| || || ||| || |||||||| || || | ||| || || || ||
Sbjct 66806 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTT 66865
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| || | ||| | |||||
Sbjct 66866 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 66903
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || ||||| || | || ||||| | || ||||| || ||||| || ||||| ||
Sbjct 66251 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 66310
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| || || | || |||||| || || |||||||||||||||||||| || || |||
Sbjct 66311 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 66370
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||| ||||| || | ||| || |||| || || ||||| || |||| ||
Sbjct 66371 ACGTTGTCGATAGTGTCAGAAGATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTC 66430
Query 225697 TTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 66431 TTGACAAAAATTTGCAT 66447
>seq9
Length=410018
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||||||||| | ||||| || | ||| ||||| ||
Sbjct 44220 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 44161
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 44160 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 44101
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 44100 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 44041
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 44040 GGTCTTACCAGTCAAAGTCTT 44020
>seq11
Length=665839
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || | ||||||||| ||||||| ||||| || | | |||||| ||
Sbjct 617247 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 617306
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 617307 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 617366
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 617367 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 617426
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 617427 GGTCTTACCAGTCAAAGTCTTAACGAA 617453
>seq2
Length=789826
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || |||||||| || ||||||||
Sbjct 26111 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 26052
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | |||||| || || |||| || |||
Sbjct 26051 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 26012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528495562838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |