Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737985.1_202016-09- 21] 587 sequences; 12,409,833 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq124 129 5e-25 seq12 125 6e-24 seq456 95.1 1e-14 seq9 93.3 4e-14 >seq124 Length=708 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| || || || || || || ||| | || || || | Sbjct 395 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 336 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || ||| ||||||||||| |||| ||||| Sbjct 335 GACACTATTG-ACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCA 277 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || ||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 276 ACAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 217 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 216 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 169 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| || | || || |||||||| || | ||| || || | Sbjct 623 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 564 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || | | |||| || || |||||| || || ||||| | || ||||| Sbjct 563 GATACCATCG-ACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 505 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| | ||||| | | ||| || | |||||||| Sbjct 504 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 445 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 444 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 397 >seq12 Length=1053926 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| |||||||| || || || || || || ||| | || || || | Sbjct 61641 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 61582 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| |||||| || || ||||| | || ||||| Sbjct 61581 GACACTATTG-ACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 61523 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| | |||| ||| || || ||| ||||||||| | |||| || | || || || Sbjct 61522 ACAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAA 61463 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||| || |||||| | || |||||||||||||| |||| || Sbjct 61462 CATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 61415 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| ||||| || | || || || || |||||| | ||| || || Sbjct 496823 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 496882 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || || || || || ||||| | || ||| Sbjct 496883 TCTGACACTATT-GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 496941 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||||| | ||| || |||| || Sbjct 496942 CCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTA 497001 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || |||||| |||| |||| ||||||||| |||| || Sbjct 497002 CAACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 497052 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 61104 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 61045 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 61044 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 60986 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || |||||| ||||||||| | ||| || | || || || Sbjct 60985 GCAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 60926 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 60925 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 60875 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| ||||| || || || || || || || ||| | || || || Sbjct 61413 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 61354 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 61353 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 61295 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 61294 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 61235 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTG 115504 |||||||| ||||| ||| | || | || ||||| ||| Sbjct 61234 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTG 61195 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 115408 AAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACAT 115467 |||| | |||| ||| || || ||| | ||||| | | ||| || | ||||||||||| Sbjct 61747 AAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACAT 61688 Query 115468 TCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||| ||||||||||| | ||| |||||||||||||| |||| || Sbjct 61687 TCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 61643 >seq456 Length=383 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || || || || || ||| | || || || Sbjct 311 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 252 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| || ||||| || || |||||| || || ||||| | || || || Sbjct 251 GACACTATT-GACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 193 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| | |||| ||| || || ||| ||||||||| | ||| || | || || || Sbjct 192 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 133 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||||||| ||||| ||| | || | || ||||| ||| | || || || Sbjct 132 TATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGTTGAGGGGTGGTAA 82 >seq9 Length=460329 Score = 93.3 bits (102), Expect = 4e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353 ||||||||| || | || || || ||||| || | ||| || || |||||| | Sbjct 77663 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 77722 Query 115354 TGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGAC 115412 || |||| || || ||| ||| || || ||||| |||| ||| || |||||| Sbjct 77723 TG-ACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 77781 Query 115413 TTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAA 115472 | || | ||| || || ||||| ||||| | | |||| || | || || |||||||||| Sbjct 77782 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAA 77841 Query 115473 AAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||| || ||| | || | || ||||||||| |||| || Sbjct 77842 AAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 77881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425340957062440