Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737985.1_202016-09-
21] 587 sequences; 12,409,833 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq12 138 1e-27
seq9 134 1e-26
seq124 125 6e-24
seq11 122 8e-23
seq456 118 9e-22
seq228 82.4 7e-11
>seq12
Length=1053926
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||||||||||||| |||| ||| | ||||| || || ||
Sbjct 62380 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 62321
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | |||| ||| ||||| ||||| || || || || ||
Sbjct 62320 GATACCATCGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATCCCTCCAGATCA 62262
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | || |||||||| || || ||||||| | | | || || ||||||||
Sbjct 62261 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAA 62202
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| || || ||||| ||||| | ||||||||||||||||| ||
Sbjct 62201 CATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 62154
Score = 138 bits (152), Expect = 1e-27
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || |||||||| |||||||| | || || | ||||| || || |||
Sbjct 496826 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 496885
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || ||| || ||| ||||| ||||| |||||||||||||
Sbjct 496886 GACACTATTGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 496943
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | || ||||| || || ||||| ||||||| | | ||| || ||| ||||
Sbjct 496944 AACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACA 497003
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || ||||| || || | || | ||||| ||
Sbjct 497004 ACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 497052
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||||||||||||||| ||||||| | || || || || ||
Sbjct 62152 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 62093
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | || | ||| |||||| ||||| ||||| || || || || ||
Sbjct 62092 GACACGATCGA-TAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCA 62034
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | || |||||||| || | ||||||| | | | || || || |||||
Sbjct 62033 ACAGAGGTTGATCTTTGCCGGTAAGTAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 61974
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| ||||| || || || || ||| | || | ||||| ||
Sbjct 61973 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 61926
Score = 122 bits (134), Expect = 8e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 61104 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 61045
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 61044 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 60986
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | ||||||||||| |||||| ||||||||| | | || || || |||||
Sbjct 60985 GCAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 60926
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||||||| || ||||| || ||
Sbjct 60925 TATTCAAAAGGAGTCCACTCTTCA 60902
Score = 113 bits (124), Expect = 4e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| |||| ||||| | || || | || || || || |||
Sbjct 61413 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 61354
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 61353 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 61295
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | ||||||||||| || ||| ||||||||| | | || || || |||||
Sbjct 61294 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 61235
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||||||| || ||||| || ||
Sbjct 61234 TATTCAAAAGGAGTCCACTCTTCA 61211
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/158 (74%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 61924 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 61865
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 61864 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 61806
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155
|| | | ||||||||||| || ||| |||||||||
Sbjct 61805 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATG 61768
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || ||| | || || || | || || | || || || || ||
Sbjct 61641 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 61582
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| || |||| ||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 61581 GACACTATTGACAACGTCAA--AAGTAAAAT-TCAA-GACAAGGAAGGTATTCCTCCAGA 61526
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| | | ||||||||||| || ||| ||||||||| | | || || || ||
Sbjct 61525 TCAACAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTA 61466
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || ||||| ||||| || || || | ||| | || | ||||| ||
Sbjct 61465 CAACATCCAAAAGGAATCTACTCTTCACCTGGTGTTGAGATTGAGAGGTGG 61415
Score = 82.4 bits (90), Expect = 7e-11
Identities = 91/120 (76%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141
|||| ||| ||||| ||||| ||||| || ||||| || | | ||||||||||| ||
Sbjct 60719 AAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAA 60661
Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
||| ||||||||| | | || || || |||||||||||||| || ||||| || ||
Sbjct 60660 GCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCCACTCTTCA 60601
>seq9
Length=460329
Score = 134 bits (148), Expect = 1e-26
Identities = 165/221 (75%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||||||||| ||||| ||||||| | ||||| || || |||||||||||
Sbjct 77664 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 77723
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| |||| | ||| ||||| ||||| || |||||||||||||| |
Sbjct 77724 GA--CAATGTCAAGTCAAAGATTCA-AGACAAGGAAGGTATCCCACCTGACCAACAAAGA 77780
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || ||||| || || ||||| ||||| | | | || || || ||||| ||||||
Sbjct 77781 TTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAA 77840
Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||||| | || ||||| | || | ||||| ||
Sbjct 77841 AAAGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 77881
>seq124
Length=708
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||||||||||||| |||| ||| | ||||| || || ||
Sbjct 623 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 564
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | |||| ||| ||||| ||||| ||||| || || ||
Sbjct 563 GATACCATCGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGATCA 505
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||||||||| || ||| | ||||| | | | || || ||||| ||
Sbjct 504 ACAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAA 445
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||| ||||| || ||| | ||||| ||| | || | ||||| ||
Sbjct 444 CATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 397
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/158 (74%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 167 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 108
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 107 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 49
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155
|| | | ||||||||||| || ||| |||||||||
Sbjct 48 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATG 11
>seq11
Length=652227
Score = 122 bits (134), Expect = 8e-23
Identities = 160/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||||||||| ||||| ||||||| | ||||| || || |||||||| ||
Sbjct 621087 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 621028
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || ||| ||||| ||||| || |||||||||||||| |
Sbjct 621027 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGAT 620970
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || ||||| || || ||||| ||||| | | | ||| | || ||||| || ||||
Sbjct 620969 TGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAA 620910
Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| ||||||| || | || ||||||| ||
Sbjct 620909 AGGAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGG 620870
>seq456
Length=383
Score = 118 bits (130), Expect = 9e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| |||| ||||| | || || | || || || || |||
Sbjct 311 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 252
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|||||||| || | ||| | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 251 GACACTATTGACAACGTTAAGTCGAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCA 193
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | ||||||||||| || ||| ||||||||| | | || || || |||||
Sbjct 192 GCAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAA 133
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||||||| || ||||| || ||
Sbjct 132 TATTCAAAAGGAGTCCACTCTTCA 109
>seq228
Length=549
Score = 82.4 bits (90), Expect = 7e-11
Identities = 91/120 (76%), Gaps = 1/120 (1%)
Strand=Plus/Plus
Query 25082 AAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAA 25141
|||| ||| ||||| ||||| ||||| || ||||| || | | ||||||||||| ||
Sbjct 13 AAAATTCAA-GACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTTTGCCGGTAA 71
Query 25142 ACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
||| ||||||||| | | || || || |||||||||||||| || ||||| || ||
Sbjct 72 GCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTCCACTCTTCA 131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433324899944405
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