Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737985.1_202016-09-
21] 587 sequences; 12,409,833 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9 199 8e-46
seq124 197 3e-45
seq11 176 9e-39
seq12 172 1e-37
seq456 163 6e-35
seq228 114 3e-20
>seq9
Length=460329
Score = 199 bits (220), Expect = 8e-46
Identities = 176/220 (80%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || |||||||||| ||| |||||||| || || || || ||||
Sbjct 77883 TACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 77824
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 77823 ACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 77764
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||||||||||| || ||||| ||||| || ||| || ||| |
Sbjct 77763 GGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 77704
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| |||||
Sbjct 77703 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 77664
>seq124
Length=708
Score = 197 bits (218), Expect = 3e-45
Identities = 183/232 (79%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || || |||| ||||| |||||||| || ||||||||||
Sbjct 395 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 454
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || ||||||||||||| ||||| || || ||||| || | |||||||||||||||||
Sbjct 455 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 514
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| |||||||| || | || || || || || ||||| || ||| |
Sbjct 515 GAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAA 574
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813
||||||| ||||| || || || ||||| ||||| || || |||||||| ||
Sbjct 575 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 626
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 167 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 226
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || |||||||| || | ||| |||||||| ||||
Sbjct 227 ACAAGGTTCTACCATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAG 286
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||| |||||||||||||| ||| || || ||||| || || || ||| |
Sbjct 287 GGATACCTTCTTTATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 346
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 347 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 395
Score = 132 bits (146), Expect = 9e-26
Identities = 127/163 (78%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707
||||||| ||||||||||| || || ||||| || | |||||| || |||||||| || |
Sbjct 5 TTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATAC 64
Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767
||||||| |||||||| || | || || || ||||| || ||| || ||| || || |
Sbjct 65 CTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTA 124
Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 125 GGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 167
>seq11
Length=652227
Score = 176 bits (194), Expect = 9e-39
Identities = 171/220 (78%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| ||||| || | || || || || | ||| ||||| || || || || || ||||
Sbjct 620868 TACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 620927
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||||| ||||||||||||| | ||| || ||||||||||| | ||||||||| || || |
Sbjct 620928 ATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 620987
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| |
Sbjct 620988 GGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAA 621047
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|||||||||| || ||||| || ||||| ||||| || ||
Sbjct 621048 CTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 621087
>seq12
Length=1053926
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 82614 GTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCA 82673
|| || || ||||| || || |||||||| || |||||||||||||||| || || ||
Sbjct 62184 GTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCG 62243
Query 82674 GCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTT 82733
|||||||| | |||||||||||||||||| || |||||||| |||||||| || | ||
Sbjct 62244 GCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTA 62303
Query 82734 ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTC 82793
|| || || || ||||| || ||| |||||||| ||||| || || || ||||| |||
Sbjct 62304 ACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTC 62363
Query 82794 TTTACAAATATCTGCATTAT 82813
|| || || |||||||| ||
Sbjct 62364 TTGACGAAAATCTGCATAAT 62383
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | || || ||||| ||||||||||| || || || || || || ||
Sbjct 497053 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 496994
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | ||||||| ||||| | ||| || ||||||||||| | ||||||||| || || ||
Sbjct 496993 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 496934
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| | || ||||| ||||| || ||| || ||| ||
Sbjct 496933 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 496874
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || ||||| || || || ||||| || || || |||||
Sbjct 496873 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 496826
Score = 167 bits (184), Expect = 5e-36
Identities = 178/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 60870 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 60929
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| |||||||||||||| || ||||| || | |||||| || |
Sbjct 60930 AGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGT 60989
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| || | || || || ||||| || ||| ||
Sbjct 60990 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 61049
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 61050 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61104
Score = 165 bits (182), Expect = 2e-35
Identities = 176/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || | ||| ||||||||||| || || || || || ||||
Sbjct 61413 TACCACCTCTCAATCTCAACACCAGGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 61472
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | ||||||| ||||||||||| || || ||||| || | |||||||||||||||||
Sbjct 61473 ACAAGGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 61532
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCT 82760
| || |||||||| |||||||| ||| ||||| || || ||||| || || || |||
Sbjct 61533 GAATACCTTCCTTGTCTTGAAT-TTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 61591
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | ||||| ||||| ||||| | || || || || || |||||
Sbjct 61592 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 61641
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || ||||| ||||||||||| || || || || || ||||
Sbjct 61924 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 61983
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | |||||||||||||||| | || || |||||||| | || |||||||||||||
Sbjct 61984 ACAAGGTTCTACCGTCTTCTAGCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAG 62043
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || || || || | || || || || ||||| || | ||| |
Sbjct 62044 GGATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAA 62103
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || ||||| || || || || ||||| ||||| ||||| ||||||||
Sbjct 62104 CCTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 62152
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 82590 CTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATT 82649
||||| | || || | ||| ||||| || || || || ||||| || || || || ||
Sbjct 61193 CTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTT 61252
Query 82650 CTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCT 82709
||||| ||||||||||| || || ||||| || | |||||| || |||||||| || |||
Sbjct 61253 CTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCT 61312
Query 82710 TCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAA 82769
||||| |||||||| || | || || || ||||| || ||| || ||| || || |
Sbjct 61313 TCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGG 61372
Query 82770 GTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| ||||||| ||||| || || || |||||
Sbjct 61373 GTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 61413
Score = 132 bits (146), Expect = 9e-26
Identities = 127/163 (78%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 82648 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTC 82707
||||||| ||||||||||| || || ||||| || | |||||| || |||||||| || |
Sbjct 61762 TTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATAC 61821
Query 82708 CTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCA 82767
||||||| |||||||| || | || || || ||||| || ||| || ||| || || |
Sbjct 61822 CTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTA 61881
Query 82768 AAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 61882 GGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 61924
Score = 114 bits (126), Expect = 3e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 60569 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 60628
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 60629 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 60688
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
||||||| || |||||||| |||||||| ||
Sbjct 60689 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 60719
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| |||||||| | || || || |||| ||||| |||||||| || ||||||||||
Sbjct 61641 TACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAG 61700
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTT 82688
| || ||||||||||||| ||||| || || ||||| || | ||||
Sbjct 61701 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTT 61747
>seq456
Length=383
Score = 163 bits (180), Expect = 6e-35
Identities = 177/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 77 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 136
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 137 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 196
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755
||||||| || |||||||| |||||||| || | || || || ||||| || ||| ||
Sbjct 197 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 256
Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| || || | ||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 257 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 311
>seq228
Length=549
Score = 114 bits (126), Expect = 3e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635
|||| |||| || ||||| | || || | ||| ||||| || || || || ||||| |
Sbjct 163 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 104
Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695
| || || || ||||||| ||||||||||| || || ||||| || | |||||| || |
Sbjct 103 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 44
Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726
||||||| || |||||||| |||||||| ||
Sbjct 43 CTGGAGGAATACCTTCCTTGTCTTGAATTTT 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981819815738993
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |