Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737995.1_202016-09- 21] 325 sequences; 12,358,422 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq12 95.1 9e-15 seq203 91.5 1e-13 seq153 89.7 4e-13 >seq12 Length=1056472 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || | || || ||||| || || || |||||| ||||| ||| | Sbjct 497914 CAAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATC 497973 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | ||| || || || || || ||| | ||||| Sbjct 497974 TTCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTG- 498032 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| || ||| | |||||| | |||| || |||| Sbjct 498033 --ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGA 498090 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| || || |||||||||||||| || |||| || Sbjct 498091 CTACAACATCCAAAAGGAATCTACTCTACACTTGGTCTT 498129 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || ||| | || || || || || ||| | || ||| | | Sbjct 65130 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 65071 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||||| |||||| || || || ||| | ||| | |||| Sbjct 65070 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 65011 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | || ||||| || || |||||||||||| | ||| || | || |||||| Sbjct 65010 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 64951 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 ||||| ||||| || |||||||| Sbjct 64950 ATTCAAAAGGAGTCCACTCTTCA 64928 >seq203 Length=478 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 21918 AAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAA 21977 |||||| |||||||| ||| | ||| | ||||||||| | || |||||||| || Sbjct 439 AAAATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAG 380 Query 21978 CAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAT 22037 |||||||||||| | ||| || | || ||||| || || ||||||||||||||||| Sbjct 379 CAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 320 Query 22038 ATGGTATT 22045 |||| || Sbjct 319 TTGGTGTT 312 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || ||| | || || || || || ||| | || ||| | | Sbjct 295 ATGCAAATTTTCGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 236 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||||| |||||| || || || ||| | ||| | |||| Sbjct 235 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 176 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | || ||||| || ||||||||||||||| | ||| || | || |||||| Sbjct 175 CAAAGATTGATTTTTGCCGGTAAACAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 116 Query 22014 ATTCAGAAGGAATCTACTCTTCA 22036 ||||| ||||| || |||||||| Sbjct 115 ATTCAAAAGGAGTCCACTCTTCA 93 >seq153 Length=589 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||| ||| | ||| | ||||||||| | || |||||||| || ||||||||| Sbjct 204 GATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTTTGCTGGTAAGCAACTAGAA 145 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||| | ||| || | || ||||| || || ||||||||||||||||| |||| || Sbjct 144 GATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTT 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358123381490050