Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737995.1_202016-09- 21] 325 sequences; 12,358,422 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq12 127 1e-24 seq203 118 7e-22 seq153 86.0 4e-12 >seq12 Length=1056472 Score = 127 bits (140), Expect = 1e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || | Sbjct 64896 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 64955 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 ||||||| || | | |||| || |||||||| ||||| || |||| || |||||||| Sbjct 64956 AGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGT 65015 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | ||||| || ||| | || | ||| | Sbjct 65016 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 65075 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || ||||| ||||| || ||||| Sbjct 65076 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 65130 >seq203 Length=478 Score = 118 bits (130), Expect = 7e-22 Identities = 168/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 34744 ATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTAT 34802 |||| || || ||||||||||||| ||| ||||||| ||| |||||| ||||| || | Sbjct 61 ATCAGTTACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGT 120 Query 34803 AGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGT 34862 ||||||| || | | |||| || ||||| || ||||| || |||| || |||||||| Sbjct 121 AGTCCGACAGCGTTCTACCATCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGT 180 Query 34863 CTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGG 34922 || | || | || |||||||| | ||||| || ||| | || | ||| | Sbjct 181 CTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAG 240 Query 34923 CCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| ||||| || || || ||||| || || || ||||| Sbjct 241 ATTCAACCTCTAGGGTTATAGTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 295 >seq153 Length=589 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| |||| |||| || | || ||| |||||||||||||| || || Sbjct 299 CCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGAC 358 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | | | || ||||||||||| ||||| || |||| || ||| || ||| | || Sbjct 359 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 418 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | ||||| ||||||| | || | || | || || Sbjct 419 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 478 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| || || || || || || || || ||||| Sbjct 479 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691509951175