Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737995.1_202016-09- 21] 325 sequences; 12,358,422 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq12 174 4e-38 seq9 159 8e-34 seq11 158 3e-33 seq203 145 2e-29 seq153 132 1e-25 seq2 91.5 4e-13 >seq12 Length=1056472 Score = 174 bits (192), Expect = 4e-38 Identities = 170/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| ||||| ||||| ||||||| ||||| |||| ||||||||| || Sbjct 498133 TCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 498074 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || |||||||||||||| Sbjct 498073 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 498014 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || || ||||| || | ||| || || | || || Sbjct 498013 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAAT 497954 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || ||||| || | ||| | |||||| || Sbjct 497953 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 497915 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| ||| Sbjct 64916 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 64975 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 |||||||| ||||| || || || || | || ||| ||||| || ||||||||||||||| Sbjct 64976 TCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 65035 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 ||||| || || ||| || || || ||||| || | ||| || |||| || || Sbjct 65036 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 65095 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||| || || | || | |||||| Sbjct 65096 GTCTTACCTGTCAGTGTCTTGACAAAAATTTGCAT 65130 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| || Sbjct 65143 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 65202 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||||||| ||| || || ||||| | | ||||| || || || ||||||||||| Sbjct 65203 GTCTTCTAGCTACTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGGGATACCTTCCTT 65262 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| ||||| || ||| || ||||| ||||| |||| ||| || ||||| ||||| Sbjct 65263 GTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAACCTCTAAAGTGAT 65322 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 || || || |||||||| || Sbjct 65323 GGTTTTACCGGTCAAAGTCTT 65343 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||| || | ||||| || || || | |||||||| | || ||||| Sbjct 65369 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 65428 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || |||||||||||||| || || ||||| | || |||||| || || || ||||||||| Sbjct 65429 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 65488 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 |||||||| || || ||| || |||||||| || || | ||| || || || | Sbjct 65489 TTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGCT 65548 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || |||||||| || | ||| | ||||| Sbjct 65549 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 65586 >seq9 Length=440331 Score = 159 bits (176), Expect = 8e-34 Identities = 156/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | ||||||||||||||| | ||||| || | ||| ||||| || Sbjct 71819 TCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 71760 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 71759 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 71700 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| |||||| ||| ||| || || ||||| || | ||| || || || ||||| Sbjct 71699 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 71640 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || |||||||| || Sbjct 71639 GGTCTTACCAGTCAAAGTCTT 71619 >seq11 Length=650725 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | || | ||||||||| ||||||| ||||| || | | |||||| || Sbjct 619709 TCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACC 619768 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||||| ||||| ||||| | || ||||||||| || || ||||||||||| Sbjct 619769 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 619828 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| ||| || |||||||| || | ||| || || || ||||| Sbjct 619829 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGAT 619888 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||| || |||||||| || | ||| Sbjct 619889 GGTCTTACCAGTCAAAGTCTTAACGAA 619915 >seq203 Length=478 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| ||||||||| |||||||| || ||||| | |||||| || | || ||||| ||| Sbjct 81 CTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCA 140 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 |||||||| || || || || || || | || ||| ||||| || ||||||||||||||| Sbjct 141 TCTTCTAGTTGTTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTG 200 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 ||||| || || ||| || || || ||||| || | ||| || |||| || || Sbjct 201 TCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCAGAAGATTCAACCTCTAGGGTTATA 260 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || |||| || || | ||| | |||||| Sbjct 261 GTCTTACCTGTCAGTGTCTTGACGAAAATTTGCAT 295 Score = 104 bits (114), Expect = 6e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| || Sbjct 308 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 367 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||||| ||||| ||||| || || | || ||||| || || || |||||||| || Sbjct 368 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 427 Query 225618 GTCTTGGATCTT 225629 ||||| || || Sbjct 428 ATCTTGAATTTT 439 >seq153 Length=589 Score = 132 bits (146), Expect = 1e-25 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| ||||| ||||| ||||||| ||||| || | ||| ||||| || Sbjct 82 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 141 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||||| ||||| ||||| || || | || ||||| || || || |||||||| || Sbjct 142 ATCTTCTAGTTGCTTACCAGCAAAAATCAATCTCTGTTGATCCGGAGGGATACCTTCTTT 201 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||||| ||||| || || || || ||||| || | ||| || |||| || || Sbjct 202 ATCTTGAATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 261 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || | |||||| | ||| | |||||| Sbjct 262 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 297 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || ||||| || | || ||||| | || ||||| || ||||| || ||||| || Sbjct 329 GTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCG 388 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || || || | || |||||| || || |||||||||||||||||||| || || || Sbjct 389 GCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGAATTTTACTTTTG 448 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || || || ||||| || | ||| || |||| || || ||||| || || | |||| Sbjct 449 ACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTT 508 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | |||||| Sbjct 509 TTGACGAAAATTTGCAT 525 >seq2 Length=805083 Score = 91.5 bits (100), Expect = 4e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || |||||||| || || |||||||| || |||||||| Sbjct 36403 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCGGAGACATCACC 36344 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569 |||| ||||| | |||||| || || |||| || ||| Sbjct 36343 ACCTTGGGTTTCAATAACAGGCAAAGCAGTTAAAGAACCA 36304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526234225550