Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738015.1_202016-09-
21] 263 sequences; 12,099,394 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq12 122 2e-22
seq9 120 7e-22
seq11 104 6e-17
>seq12
Length=1043289
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||||| ||| ||||||||| | || || |||
Sbjct 489172 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 489231
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 489232 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 489291
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| |||| || || |||||||| |||
Sbjct 489292 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 489351
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 489352 TTGGTCTTGAGA 489363
Score = 104 bits (114), Expect = 6e-17
Identities = 148/207 (71%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || || ||||| || || || || | || || ||| ||||||||| |
Sbjct 58827 TTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCTGACACTAT 58768
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| || |||||||| || ||||| ||| || ||| |||||| |
Sbjct 58767 TGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATT 58708
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|| || ||||| ||||| | |||||||| || || || | || ||||| | || ||
Sbjct 58707 GATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAA 58648
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAG 206384
||||| |||||||||||||| |||||
Sbjct 58647 GGAGTCCACTCTTCACCTTGTCTTGAG 58621
Score = 98.7 bits (108), Expect = 2e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 59049 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 58990
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| || ||||||||||| |||||||| || ||||| || ||| | || ||
Sbjct 58989 CGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAACAGAGATTGATTTT 58930
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| | |||||||| || || ||| | || |||||| |||| || || ||
Sbjct 58929 TGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATC 58870
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|||||||||| | || ||||||
Sbjct 58869 TACTCTTCACTTGGTGTTGAGA 58848
Score = 91.5 bits (100), Expect = 3e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| |||||||| || || ||| || |||
Sbjct 59516 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCCGAC 59457
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || || || || || ||||| || || || ||
Sbjct 59456 ACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAACAG 59397
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| |||||| | ||||| || || || ||| | || |||||| ||
Sbjct 59396 AGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 59337
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||||||||| | || ||||||
Sbjct 59336 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 59304
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 59277 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 59218
Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| |||| |||| ||||||| || ||||| ||| || || |||||| | ||
Sbjct 59217 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 59160
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| ||||| ||||| ||||||| || || || || | ||||| ||| | |||||||||
Sbjct 59159 TTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAG 59100
Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385
||||| | || | || ||||||
Sbjct 59099 TCTACGTTGCATTTGGTGTTGAGA 59076
Score = 86.0 bits (94), Expect = 1e-11
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 204757 TCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCC 204816
|||||| || | |||||||||||| || || |||| || ||||||| ||| || || ||
Sbjct 59304 TCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACC 59363
Query 204817 ATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
||||| |||||||| ||||| ||||| | || ||||||
Sbjct 59364 GTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGA 59403
>seq9
Length=433657
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 70432 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 70491
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 70492 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 70551
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| | || ||
Sbjct 70552 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 70611
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || ||| | ||| | || ||||||
Sbjct 70612 AGAATCCACTTTGCACTTAGTCTTGAGA 70639
>seq11
Length=650133
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 622984 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 622925
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || ||| |||||| | ||||| || || |||
Sbjct 622924 AAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 622865
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || ||| | | || |||||| |||| ||||| || ||| | ||
Sbjct 622864 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAAGAATCCACTTTACAT 622805
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 622804 TTGGTCTTGAGA 622793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181816817633223
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |