Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738015.1_202016-09-
21] 263 sequences; 12,099,394 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 178 1e-39
seq5 129 7e-25
seq9 125 8e-24
seq11 114 1e-20
>seq12
Length=1043289
Score = 178 bits (196), Expect = 1e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || || |||||||| || || |||||||| || |
Sbjct 58835 ATGCAAATTTTTGTCAAGACACTGACAGGTAAGACTATAACCCTAGAGGTTGAATCTTCT 58776
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | |||||||| |||||||| || |||||||||||||||
Sbjct 58775 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 58716
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||||||||| || |||| | | || || | ||||| |||
Sbjct 58715 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 58656
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||| ||||||||||| || ||||||
Sbjct 58655 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTG 58623
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||||||||| || || ||||| || |
Sbjct 489148 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCT 489207
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || |||||||| || ||||| || |||||
Sbjct 489208 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 489267
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | || |||| | | || | | ||||| ||
Sbjct 489268 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAAC 489327
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| ||||| || | ||||||
Sbjct 489328 ATCCAAAAGGAATCTACTCTACACTTGGTCTTG 489360
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || || || || |||||||| || || |||||||| ||
Sbjct 59063 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 59004
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | || ||| ||||| || || || || || ||||| || ||
Sbjct 59003 GACACTATTGACAACGTCAAAAGTAAGATTCAAGATAAAGAAGGTATCCCTCCGGATCAA 58944
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | |||||||||||||||||||| || |||| | | ||| | | ||||| ||
Sbjct 58943 CAGAGATTGATTTTTGCTGGTAAGCAACTAGAAGATGGTAGAACCTTGTCTGACTACAAC 58884
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 58883 ATCCAAAAGGAATCTACTCTTCA 58861
Score = 123 bits (136), Expect = 3e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | ||||| || || || ||| | |||||||| ||
Sbjct 59519 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATCACTTTAGAGGTTGAATCCTCC 59460
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | ||||| ||||||||||| || || |||||||| ||
Sbjct 59459 GACACGATCGATAACGTTAAGTCGAAAATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 59400
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| |||||||| || || || | | | ||| | | ||||| ||
Sbjct 59399 CAGAGGTTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 59340
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
||||||||||||| ||||||||
Sbjct 59339 ATCCAAAAGGAATCTACTCTTCA 59317
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || || || || |||||||| || || |||||||| ||
Sbjct 59291 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 59232
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | || ||||||||| |||||||| || ||||||||||| ||
Sbjct 59231 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 59172
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||| ||||||||||| || || | | | || || | || |||||
Sbjct 59171 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 59112
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| || || || || || | ||| | || |||
Sbjct 59111 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTG 59079
>seq5
Length=547772
Score = 129 bits (142), Expect = 7e-25
Identities = 320/476 (67%), Gaps = 21/476 (4%)
Strand=Plus/Minus
Query 81223 TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCG 81281
|| ||| |||||||||| ||||| ||||| || || | ||||| || | ||| ||
Sbjct 292551 TCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCTCTTGCA-CG 292493
Query 81282 CGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCA 81341
||||| | ||| ||||| | | || | ||| || | ||| || ||||||||
Sbjct 292492 AATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCAGCATGCCA 292433
Query 81342 TGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGGTTGACGTAAC 81397
||| ||||| || | ||| | || || ||| | |||||||||| || ||||
Sbjct 292432 TGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTT-ATTACCACCCTGGTCAACATAAC 292374
Query 81398 GGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTAC 81457
|||| || || || ||||| | |||||| || | ||| | || |||||| ||||
Sbjct 292373 GGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCGTTTGTAC 292314
Query 81458 CCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACC 81517
| | || || || | | || | || ||| ||||| || ||||| | |
Sbjct 292313 CAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCACCAG--C 292256
Query 81518 ACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTT 81575
| ||| |||||| |||||| |||| ||| || ||||| |||||||| || |
Sbjct 292255 AGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAGTCCTC 292196
Query 81576 TTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAAC 81633
|||||| ||| ||||||||| ||||| ||||| |||| ||| ||||||||||||
Sbjct 292195 CTTCATGGCAACCAAGAAACAAGAGGACATTTGAGG--TTTTGGAGTACCGGCATTGAAC 292138
Query 81634 AGTGTTGGGGTCGCGTGAATGAAATAACGGTTT---GACATCAGGTCATAGGTTTC 81686
| ||||| | |||||| | ||||| ||| ||||||| || ||| |||||
Sbjct 292137 AACGTTGGAGAGGCGTGAGTAAAATA---TTTTAGAGACATCAAGTTATACGTTTC 292085
>seq9
Length=433657
Score = 125 bits (138), Expect = 8e-24
Identities = 338/512 (66%), Gaps = 15/512 (3%)
Strand=Plus/Plus
Query 81232 TTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTC 81290
||||||||| ||||||||||| || || | ||||| || | ||| || || ||
Sbjct 235133 TTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCTCTTGCA-CGAATTTCTTC 235191
Query 81291 ATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAG 81350
| ||| || | | | |||| |||||| | ||| || ||||||||||||||||
Sbjct 235192 CTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCTGCATGCCATGGCTCCAA 235251
Query 81351 ATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGT 81404
| | ||||| | || |||| || ||||||||| || |||||||||||
Sbjct 235252 GAAAAGGGCGAAAGCACCAGGTCTCTTGTTAC---CACCCTGGTCCACATAACGGGCAGT 235308
Query 81405 CGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGAT 81464
|| || ||||| | |||||| || | || | ||| |||||| ||||| ||||
Sbjct 235309 ATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCGTTGGTACCAGCGAT 235368
Query 81465 ACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTT-- 81522
| || || ||| || | ||| |||| |||||| | ||||||| || |||
Sbjct 235369 ATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCACCTG--CAGTTTTG 235426
Query 81523 GAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATG 81582
|||||| |||||| |||| || |||||||| || ||||| || | ||||||
Sbjct 235427 GAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAGTCATCCTTCATG 235486
Query 81583 TCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGG 81642
||| |||||||| ||||| ||||| | | || || ||||| | ||||||
Sbjct 235487 GCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTGAATAAAGTTGGG 235546
Query 81643 GTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATA 81702
| |||||| |||| || | ||||||| | ||| || | | || | |||
Sbjct 235547 GAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGCACAGATTCGATA 235606
Query 81703 TCGTCACCGTGAATACCGATAGCTACACGCAT 81734
||| ||| || ||||| | || ||||||||
Sbjct 235607 TCGCTACCATGGATACCTAGCGCCACACGCAT 235638
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || ||||| || ||| | |||
Sbjct 70433 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 70492
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || ||||| |||||||| || || || || ||||| || | |
Sbjct 70493 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 70552
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || || | | | ||| | | ||||| || | |||||
Sbjct 70553 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 70612
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||| | || ||||||||
Sbjct 70613 GAATCCACTTTGCACTTAGTCTTG 70636
>seq11
Length=650133
Score = 114 bits (126), Expect = 1e-20
Identities = 159/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 27396 TATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGT 27455
|||| | || || | | ||| || ||||| | || || ||||| || ||| | || ||
Sbjct 623018 TATTCCAATTTTGTACAGCTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGT 622959
Query 27456 TGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCC 27515
||| || ||| | ||||| ||| | ||| | || || || |||||||| || || ||
Sbjct 622958 TGAATCTTCTGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCC 622899
Query 27516 TCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGC 27575
|| ||||| || | | || ||||||||||||||| | || || | | | || ||| |
Sbjct 622898 ACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATC 622839
Query 27576 AGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||| || ||||||| ||||||||| | ||| | ||||||
Sbjct 622838 TGACTACAACATCCAAAAAGAATCCACTTTACATTTGGTCTTG 622796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308525104560
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